Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf4lE9Q2N0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf4lE9Q2N0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf4lE9Q2N0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4lE9Q2N0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.39■□□□□ 0.85
Cpsf4lE9Q2N0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4lE9Q2N0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4lE9Q2N0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4lE9Q2N0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4lE9Q2N0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf4lE9Q2N0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.37■□□□□ 0.85
Cpsf4lE9Q2N0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4lE9Q2N0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4lE9Q2N0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cpsf4lE9Q2N0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf4lE9Q2N0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.35■□□□□ 0.85
Cpsf4lE9Q2N0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf4lE9Q2N0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4lE9Q2N0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Cpsf4lE9Q2N0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf4lE9Q2N0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Cpsf4lE9Q2N0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cpsf4lE9Q2N0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.33■□□□□ 0.85
Cpsf4lE9Q2N0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf4lE9Q2N0 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.32■□□□□ 0.84
Cpsf4lE9Q2N0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.32■□□□□ 0.84
Cpsf4lE9Q2N0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpsf4lE9Q2N0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4lE9Q2N0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cpsf4lE9Q2N0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4lE9Q2N0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4lE9Q2N0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4lE9Q2N0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4lE9Q2N0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4lE9Q2N0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4lE9Q2N0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf4lE9Q2N0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Cpsf4lE9Q2N0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.27■□□□□ 0.84
Cpsf4lE9Q2N0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4lE9Q2N0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf4lE9Q2N0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf4lE9Q2N0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf4lE9Q2N0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Cpsf4lE9Q2N0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf4lE9Q2N0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf4lE9Q2N0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf4lE9Q2N0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf4lE9Q2N0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf4lE9Q2N0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf4lE9Q2N0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4lE9Q2N0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4lE9Q2N0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4lE9Q2N0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4lE9Q2N0 Gm6821-201ENSMUST00000107540 542 ntBASIC20.22■□□□□ 0.83
Cpsf4lE9Q2N0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf4lE9Q2N0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpsf4lE9Q2N0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.22■□□□□ 0.83
Cpsf4lE9Q2N0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4lE9Q2N0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4lE9Q2N0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4lE9Q2N0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf4lE9Q2N0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf4lE9Q2N0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.19■□□□□ 0.82
Cpsf4lE9Q2N0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.18■□□□□ 0.82
Cpsf4lE9Q2N0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cpsf4lE9Q2N0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cpsf4lE9Q2N0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
Cpsf4lE9Q2N0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf4lE9Q2N0 Gm8503-201ENSMUST00000118131 455 ntBASIC20.15■□□□□ 0.82
Cpsf4lE9Q2N0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.15■□□□□ 0.82
Cpsf4lE9Q2N0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.15■□□□□ 0.82
Cpsf4lE9Q2N0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf4lE9Q2N0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cpsf4lE9Q2N0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.13■□□□□ 0.81
Cpsf4lE9Q2N0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cpsf4lE9Q2N0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.13■□□□□ 0.81
Cpsf4lE9Q2N0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.13■□□□□ 0.81
Cpsf4lE9Q2N0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpsf4lE9Q2N0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpsf4lE9Q2N0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpsf4lE9Q2N0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpsf4lE9Q2N0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpsf4lE9Q2N0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.09■□□□□ 0.81
Cpsf4lE9Q2N0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms