Protein–RNA interactions for Protein: E0CXM8

Gm43720, Predicted gene 43720, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm43720E0CXM8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm43720E0CXM8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm43720E0CXM8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm43720E0CXM8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm43720E0CXM8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm43720E0CXM8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm43720E0CXM8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm43720E0CXM8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm43720E0CXM8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm43720E0CXM8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm43720E0CXM8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm43720E0CXM8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm43720E0CXM8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm43720E0CXM8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm43720E0CXM8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.24■□□□□ 0.83
Gm43720E0CXM8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm43720E0CXM8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm43720E0CXM8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm43720E0CXM8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm43720E0CXM8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm43720E0CXM8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm43720E0CXM8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm43720E0CXM8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm43720E0CXM8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm43720E0CXM8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm43720E0CXM8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm43720E0CXM8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm43720E0CXM8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm43720E0CXM8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm43720E0CXM8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm43720E0CXM8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.18■□□□□ 0.82
Gm43720E0CXM8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm43720E0CXM8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm43720E0CXM8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm43720E0CXM8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm43720E0CXM8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm43720E0CXM8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm43720E0CXM8 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.16■□□□□ 0.82
Gm43720E0CXM8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm43720E0CXM8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm43720E0CXM8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm43720E0CXM8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm43720E0CXM8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm43720E0CXM8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm43720E0CXM8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm43720E0CXM8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm43720E0CXM8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm43720E0CXM8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm43720E0CXM8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm43720E0CXM8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.14■□□□□ 0.81
Gm43720E0CXM8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm43720E0CXM8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Gm43720E0CXM8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Gm43720E0CXM8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm43720E0CXM8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm43720E0CXM8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm43720E0CXM8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm43720E0CXM8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm43720E0CXM8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Gm43720E0CXM8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm43720E0CXM8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm43720E0CXM8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm43720E0CXM8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm43720E0CXM8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.1■□□□□ 0.81
Gm43720E0CXM8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm43720E0CXM8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm43720E0CXM8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm43720E0CXM8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm43720E0CXM8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm43720E0CXM8 Gm25238-201ENSMUST00000174914 89 ntBASIC20.08■□□□□ 0.81
Gm43720E0CXM8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Gm43720E0CXM8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm43720E0CXM8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm43720E0CXM8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.06■□□□□ 0.8
Gm43720E0CXM8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm43720E0CXM8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm43720E0CXM8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm43720E0CXM8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm43720E0CXM8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm43720E0CXM8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm43720E0CXM8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm43720E0CXM8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm43720E0CXM8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm43720E0CXM8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms