Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a5A6H584 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col6a5A6H584 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a5A6H584 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a5A6H584 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.99■□□□□ 0.63
Col6a5A6H584 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.99■□□□□ 0.63
Col6a5A6H584 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a5A6H584 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a5A6H584 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a5A6H584 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a5A6H584 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a5A6H584 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.96■□□□□ 0.63
Col6a5A6H584 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.96■□□□□ 0.63
Col6a5A6H584 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.96■□□□□ 0.63
Col6a5A6H584 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a5A6H584 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.95■□□□□ 0.62
Col6a5A6H584 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a5A6H584 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col6a5A6H584 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.95■□□□□ 0.62
Col6a5A6H584 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a5A6H584 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a5A6H584 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a5A6H584 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a5A6H584 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.93■□□□□ 0.62
Col6a5A6H584 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a5A6H584 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a5A6H584 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a5A6H584 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col6a5A6H584 Gm5921-201ENSMUST00000075898 882 ntBASIC18.91■□□□□ 0.62
Col6a5A6H584 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.89■□□□□ 0.62
Col6a5A6H584 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col6a5A6H584 Gm14523-201ENSMUST00000117260 558 ntBASIC18.89■□□□□ 0.61
Col6a5A6H584 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a5A6H584 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.89■□□□□ 0.61
Col6a5A6H584 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.89■□□□□ 0.61
Col6a5A6H584 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a5A6H584 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a5A6H584 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.88■□□□□ 0.61
Col6a5A6H584 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a5A6H584 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a5A6H584 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.87■□□□□ 0.61
Col6a5A6H584 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a5A6H584 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a5A6H584 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
Col6a5A6H584 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a5A6H584 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.85■□□□□ 0.61
Col6a5A6H584 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a5A6H584 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a5A6H584 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.84■□□□□ 0.61
Col6a5A6H584 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.84■□□□□ 0.61
Col6a5A6H584 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a5A6H584 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col6a5A6H584 Particl-201ENSMUST00000205370 1560 ntBASIC18.83■□□□□ 0.6
Col6a5A6H584 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a5A6H584 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a5A6H584 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a5A6H584 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Col6a5A6H584 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.81■□□□□ 0.6
Col6a5A6H584 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a5A6H584 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a5A6H584 Gm10420-201ENSMUST00000121713 882 ntBASIC18.8■□□□□ 0.6
Col6a5A6H584 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.79■□□□□ 0.6
Col6a5A6H584 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a5A6H584 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a5A6H584 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col6a5A6H584 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col6a5A6H584 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col6a5A6H584 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col6a5A6H584 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.76■□□□□ 0.59
Col6a5A6H584 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a5A6H584 Gm27502-201ENSMUST00000183495 199 ntBASIC18.76■□□□□ 0.59
Col6a5A6H584 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col6a5A6H584 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a5A6H584 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col6a5A6H584 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.74■□□□□ 0.59
Col6a5A6H584 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.74■□□□□ 0.59
Col6a5A6H584 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.74■□□□□ 0.59
Col6a5A6H584 Gm45364-201ENSMUST00000210883 159 ntBASIC18.74■□□□□ 0.59
Col6a5A6H584 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.74■□□□□ 0.59
Col6a5A6H584 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a5A6H584 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col6a5A6H584 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a5A6H584 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col6a5A6H584 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a5A6H584 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.73■□□□□ 0.59
Col6a5A6H584 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.73■□□□□ 0.59
Col6a5A6H584 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Col6a5A6H584 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a5A6H584 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a5A6H584 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col6a5A6H584 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.72■□□□□ 0.59
Col6a5A6H584 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a5A6H584 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col6a5A6H584 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col6a5A6H584 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col6a5A6H584 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.71■□□□□ 0.59
Col6a5A6H584 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col6a5A6H584 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col6a5A6H584 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col6a5A6H584 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms