Protein–RNA interactions for Protein: A0A140LIR9

Gm4881, Predicted gene 4881, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4881A0A140LIR9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm4881A0A140LIR9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm4881A0A140LIR9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm4881A0A140LIR9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm4881A0A140LIR9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm4881A0A140LIR9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm4881A0A140LIR9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm4881A0A140LIR9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm4881A0A140LIR9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gm4881A0A140LIR9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm4881A0A140LIR9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm4881A0A140LIR9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Gm4881A0A140LIR9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm4881A0A140LIR9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm4881A0A140LIR9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm4881A0A140LIR9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.84■□□□□ 0.93
Gm4881A0A140LIR9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm4881A0A140LIR9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm4881A0A140LIR9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.83■□□□□ 0.93
Gm4881A0A140LIR9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gm4881A0A140LIR9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Gm4881A0A140LIR9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm4881A0A140LIR9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm4881A0A140LIR9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm4881A0A140LIR9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm4881A0A140LIR9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm4881A0A140LIR9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm4881A0A140LIR9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gm4881A0A140LIR9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm4881A0A140LIR9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm4881A0A140LIR9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm4881A0A140LIR9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm4881A0A140LIR9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.77■□□□□ 0.92
Gm4881A0A140LIR9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Gm4881A0A140LIR9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm4881A0A140LIR9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm4881A0A140LIR9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.76■□□□□ 0.91
Gm4881A0A140LIR9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm4881A0A140LIR9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm4881A0A140LIR9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm4881A0A140LIR9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm4881A0A140LIR9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm4881A0A140LIR9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm4881A0A140LIR9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm4881A0A140LIR9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm4881A0A140LIR9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.72■□□□□ 0.91
Gm4881A0A140LIR9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm4881A0A140LIR9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Gm4881A0A140LIR9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.71■□□□□ 0.91
Gm4881A0A140LIR9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.7■□□□□ 0.9
Gm4881A0A140LIR9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Gm4881A0A140LIR9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm4881A0A140LIR9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm4881A0A140LIR9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm4881A0A140LIR9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm4881A0A140LIR9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm4881A0A140LIR9 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.67■□□□□ 0.9
Gm4881A0A140LIR9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm4881A0A140LIR9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm4881A0A140LIR9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm4881A0A140LIR9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm4881A0A140LIR9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm4881A0A140LIR9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm4881A0A140LIR9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm4881A0A140LIR9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm4881A0A140LIR9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm4881A0A140LIR9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gm4881A0A140LIR9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm4881A0A140LIR9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm4881A0A140LIR9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm4881A0A140LIR9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm4881A0A140LIR9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm4881A0A140LIR9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm4881A0A140LIR9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Gm4881A0A140LIR9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm4881A0A140LIR9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm4881A0A140LIR9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.57■□□□□ 0.88
Gm4881A0A140LIR9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm4881A0A140LIR9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms