Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.86■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.86■□□□□ 0.45
Trav3n-3A0A0G2JEM0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav3n-3A0A0G2JEM0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3n-3A0A0G2JEM0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.8■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Peli2-204ENSMUST00000226513 1320 ntBASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav3n-3A0A0G2JEM0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Gm26115-201ENSMUST00000175605 87 ntBASIC17.75■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav3n-3A0A0G2JEM0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms