Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V4A0A0B4J1J8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.86■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Tcrg-V4A0A0B4J1J8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.81■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.78■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcrg-V4A0A0B4J1J8 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.77■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.75■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.74■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tcrg-V4A0A0B4J1J8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.69■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 702.9 ms