Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trbv13-3A0A0B4J1H2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.6■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv13-3A0A0B4J1H2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv13-3A0A0B4J1H2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-3A0A0B4J1H2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv13-3A0A0B4J1H2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.52■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Gm25262-201ENSMUST00000174934 133 ntBASIC18.48■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trbv13-3A0A0B4J1H2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv13-3A0A0B4J1H2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms