Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-56A0A0A6YXG2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-56A0A0A6YXG2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-56A0A0A6YXG2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.93■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-56A0A0A6YXG2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv1-56A0A0A6YXG2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.9■□□□□ 0.14
Ighv1-56A0A0A6YXG2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.9■□□□□ 0.14
Ighv1-56A0A0A6YXG2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv1-56A0A0A6YXG2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-56A0A0A6YXG2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-56A0A0A6YXG2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.8■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ighv1-56A0A0A6YXG2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.78■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-56A0A0A6YXG2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Ighv1-56A0A0A6YXG2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-56A0A0A6YXG2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-56A0A0A6YXG2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms