Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.81■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-11A0A0A6YWI9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ighv1-11A0A0A6YWI9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.71■□□□□ 0.27
Ighv1-11A0A0A6YWI9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-11A0A0A6YWI9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-11A0A0A6YWI9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-11A0A0A6YWI9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.68■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Zfp131-205ENSMUST00000223812 663 ntBASIC16.66■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-11A0A0A6YWI9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.65■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-11A0A0A6YWI9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-11A0A0A6YWI9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-11A0A0A6YWI9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.63■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-11A0A0A6YWI9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.62■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-11A0A0A6YWI9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-11A0A0A6YWI9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Ighv1-11A0A0A6YWI9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-11A0A0A6YWI9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-11A0A0A6YWI9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms