Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6-5A0A075B6B5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav6-5A0A075B6B5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav6-5A0A075B6B5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav6-5A0A075B6B5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-5A0A075B6B5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-5A0A075B6B5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-5A0A075B6B5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav6-5A0A075B6B5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-5A0A075B6B5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-5A0A075B6B5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav6-5A0A075B6B5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-5A0A075B6B5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-5A0A075B6B5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-5A0A075B6B5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-5A0A075B6B5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-5A0A075B6B5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-5A0A075B6B5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-5A0A075B6B5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-5A0A075B6B5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-5A0A075B6B5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav6-5A0A075B6B5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-5A0A075B6B5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav6-5A0A075B6B5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Gm25262-201ENSMUST00000174934 133 ntBASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-5A0A075B6B5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav6-5A0A075B6B5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Gm27322-201ENSMUST00000184007 104 ntBASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-5A0A075B6B5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-5A0A075B6B5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-5A0A075B6B5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.38■□□□□ 0.53
Trav6-5A0A075B6B5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-5A0A075B6B5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trav6-5A0A075B6B5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-5A0A075B6B5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-5A0A075B6B5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-5A0A075B6B5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trav6-5A0A075B6B5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-5A0A075B6B5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-5A0A075B6B5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-5A0A075B6B5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-5A0A075B6B5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trav6-5A0A075B6B5 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.34■□□□□ 0.53
Trav6-5A0A075B6B5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-5A0A075B6B5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav6-5A0A075B6B5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-5A0A075B6B5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trav6-5A0A075B6B5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-5A0A075B6B5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-5A0A075B6B5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-5A0A075B6B5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-5A0A075B6B5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-5A0A075B6B5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trav6-5A0A075B6B5 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.32■□□□□ 0.52
Trav6-5A0A075B6B5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-5A0A075B6B5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-5A0A075B6B5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-5A0A075B6B5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.3■□□□□ 0.52
Trav6-5A0A075B6B5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-5A0A075B6B5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav6-5A0A075B6B5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav6-5A0A075B6B5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav6-5A0A075B6B5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-5A0A075B6B5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-5A0A075B6B5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-5A0A075B6B5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav6-5A0A075B6B5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Peli2-204ENSMUST00000226513 1320 ntBASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-5A0A075B6B5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-5A0A075B6B5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6-5A0A075B6B5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav6-5A0A075B6B5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-5A0A075B6B5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms