Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav18A0A075B656 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav18A0A075B656 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav18A0A075B656 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.54■□□□□ 0.72
Trav18A0A075B656 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Trav18A0A075B656 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav18A0A075B656 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav18A0A075B656 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav18A0A075B656 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trav18A0A075B656 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav18A0A075B656 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.51■□□□□ 0.71
Trav18A0A075B656 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav18A0A075B656 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav18A0A075B656 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav18A0A075B656 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.5■□□□□ 0.71
Trav18A0A075B656 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav18A0A075B656 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav18A0A075B656 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.49■□□□□ 0.71
Trav18A0A075B656 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav18A0A075B656 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav18A0A075B656 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav18A0A075B656 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav18A0A075B656 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav18A0A075B656 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trav18A0A075B656 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav18A0A075B656 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav18A0A075B656 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav18A0A075B656 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.46■□□□□ 0.71
Trav18A0A075B656 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav18A0A075B656 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav18A0A075B656 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav18A0A075B656 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav18A0A075B656 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav18A0A075B656 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav18A0A075B656 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav18A0A075B656 Zfp131-205ENSMUST00000223812 663 ntBASIC19.44■□□□□ 0.7
Trav18A0A075B656 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav18A0A075B656 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav18A0A075B656 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.43■□□□□ 0.7
Trav18A0A075B656 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav18A0A075B656 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav18A0A075B656 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav18A0A075B656 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav18A0A075B656 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trav18A0A075B656 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav18A0A075B656 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.41■□□□□ 0.7
Trav18A0A075B656 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav18A0A075B656 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trav18A0A075B656 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.38■□□□□ 0.69
Trav18A0A075B656 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav18A0A075B656 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav18A0A075B656 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav18A0A075B656 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav18A0A075B656 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Trav18A0A075B656 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav18A0A075B656 Gm9397-201ENSMUST00000200125 605 ntBASIC19.35■□□□□ 0.69
Trav18A0A075B656 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.35■□□□□ 0.69
Trav18A0A075B656 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav18A0A075B656 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav18A0A075B656 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav18A0A075B656 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav18A0A075B656 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Trav18A0A075B656 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav18A0A075B656 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav18A0A075B656 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav18A0A075B656 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav18A0A075B656 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav18A0A075B656 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.32■□□□□ 0.68
Trav18A0A075B656 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav18A0A075B656 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.32■□□□□ 0.68
Trav18A0A075B656 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav18A0A075B656 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav18A0A075B656 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.3■□□□□ 0.68
Trav18A0A075B656 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav18A0A075B656 Gm24970-201ENSMUST00000175582 82 ntBASIC19.29■□□□□ 0.68
Trav18A0A075B656 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.27■□□□□ 0.68
Trav18A0A075B656 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav18A0A075B656 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trav18A0A075B656 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav18A0A075B656 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav18A0A075B656 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav18A0A075B656 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav18A0A075B656 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav18A0A075B656 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav18A0A075B656 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav18A0A075B656 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms