Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-1A0A075B644 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav13-1A0A075B644 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Trav13-1A0A075B644 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Amer2-203ENSMUST00000225247 2662 ntBASIC16.82■□□□□ 0.28
Trav13-1A0A075B644 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav13-1A0A075B644 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav13-1A0A075B644 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.81■□□□□ 0.28
Trav13-1A0A075B644 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-1A0A075B644 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-1A0A075B644 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav13-1A0A075B644 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav13-1A0A075B644 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-1A0A075B644 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-1A0A075B644 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-1A0A075B644 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-1A0A075B644 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-1A0A075B644 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-1A0A075B644 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13-1A0A075B644 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13-1A0A075B644 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav13-1A0A075B644 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13-1A0A075B644 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13-1A0A075B644 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trav13-1A0A075B644 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Gm7432-201ENSMUST00000210343 879 ntBASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav13-1A0A075B644 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-1A0A075B644 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-1A0A075B644 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-1A0A075B644 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-1A0A075B644 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-1A0A075B644 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav13-1A0A075B644 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav13-1A0A075B644 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav13-1A0A075B644 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav13-1A0A075B644 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-1A0A075B644 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-1A0A075B644 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-1A0A075B644 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-1A0A075B644 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-1A0A075B644 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-1A0A075B644 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav13-1A0A075B644 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13-1A0A075B644 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13-1A0A075B644 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav13-1A0A075B644 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13-1A0A075B644 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-1A0A075B644 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav13-1A0A075B644 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.67■□□□□ 0.26
Trav13-1A0A075B644 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Gm30023-201ENSMUST00000197970 889 ntBASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-1A0A075B644 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Gm11599-201ENSMUST00000118720 878 ntBASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-1A0A075B644 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms