Protein–RNA interactions for Protein: A0A075B5Y8

Tcrg-V6, T cell receptor gamma, variable 6, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V6A0A075B5Y8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.14■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tcrg-V6A0A075B5Y8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.11■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tcrg-V6A0A075B5Y8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tcrg-V6A0A075B5Y8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tcrg-V6A0A075B5Y8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.08■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V6A0A075B5Y8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tcrg-V6A0A075B5Y8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcrg-V6A0A075B5Y8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tcrg-V6A0A075B5Y8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.01■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tcrg-V6A0A075B5Y8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V6A0A075B5Y8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms