Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv4-90A0A075B5L3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Igkv4-90A0A075B5L3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-90A0A075B5L3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Igkv4-90A0A075B5L3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv4-90A0A075B5L3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv4-90A0A075B5L3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv4-90A0A075B5L3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv4-90A0A075B5L3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Igkv4-90A0A075B5L3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv4-90A0A075B5L3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv4-90A0A075B5L3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-90A0A075B5L3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-90A0A075B5L3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-90A0A075B5L3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-90A0A075B5L3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-90A0A075B5L3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-90A0A075B5L3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-90A0A075B5L3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv4-90A0A075B5L3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv4-90A0A075B5L3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Igkv4-90A0A075B5L3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igkv4-90A0A075B5L3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Igkv4-90A0A075B5L3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.35■□□□□ 0.53
Igkv4-90A0A075B5L3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-90A0A075B5L3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-90A0A075B5L3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-90A0A075B5L3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-90A0A075B5L3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.34■□□□□ 0.53
Igkv4-90A0A075B5L3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Igkv4-90A0A075B5L3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv4-90A0A075B5L3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv4-90A0A075B5L3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv4-90A0A075B5L3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv4-90A0A075B5L3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv4-90A0A075B5L3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Igkv4-90A0A075B5L3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Igkv4-90A0A075B5L3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv4-90A0A075B5L3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-90A0A075B5L3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-90A0A075B5L3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-90A0A075B5L3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-90A0A075B5L3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-90A0A075B5L3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-90A0A075B5L3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-90A0A075B5L3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.28■□□□□ 0.52
Igkv4-90A0A075B5L3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-90A0A075B5L3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Igkv4-90A0A075B5L3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-90A0A075B5L3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Igkv4-90A0A075B5L3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Igkv4-90A0A075B5L3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-90A0A075B5L3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv4-90A0A075B5L3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv4-90A0A075B5L3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.25■□□□□ 0.51
Igkv4-90A0A075B5L3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-90A0A075B5L3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-90A0A075B5L3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Igkv4-90A0A075B5L3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-90A0A075B5L3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.24■□□□□ 0.51
Igkv4-90A0A075B5L3 Gm30023-201ENSMUST00000197970 889 ntBASIC18.23■□□□□ 0.51
Igkv4-90A0A075B5L3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-90A0A075B5L3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-90A0A075B5L3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-90A0A075B5L3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-90A0A075B5L3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Igkv4-90A0A075B5L3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Igkv4-90A0A075B5L3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.21■□□□□ 0.51
Igkv4-90A0A075B5L3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-90A0A075B5L3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-90A0A075B5L3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-90A0A075B5L3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-90A0A075B5L3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Igkv4-90A0A075B5L3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-90A0A075B5L3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.19■□□□□ 0.5
Igkv4-90A0A075B5L3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Igkv4-90A0A075B5L3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv4-90A0A075B5L3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv4-90A0A075B5L3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-90A0A075B5L3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-90A0A075B5L3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms