Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF402P-201ENST00000404435 3100 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 FUNDC2P3-201ENST00000334716 533 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 RNA5SP472-201ENST00000363868 119 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 CST13P-201ENST00000376992 428 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 NPM1P38-201ENST00000403835 865 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 IGLC6-201ENST00000410078 317 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC096915.1-201ENST00000456185 512 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC096743.1-201ENST00000485172 319 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 GTF2IP11-201ENST00000526931 420 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AP000662.1-201ENST00000530952 487 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC137695.1-201ENST00000604126 489 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC112243.1-201ENST00000623949 3851 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AL136298.2-201ENST00000556497 1570 ntBASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AL078595.2-201ENST00000605309 1780 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RPL12P1-201ENST00000374520 498 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 SNORD15A-201ENST00000384214 148 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 MSRB1P1-201ENST00000396851 354 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL353626.3-201ENST00000413399 657 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 SETP9-201ENST00000423837 832 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL606752.1-201ENST00000435442 666 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL604028.2-201ENST00000437848 788 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 FDPSP8-201ENST00000438304 1089 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC079781.1-201ENST00000441505 394 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RPSAP49-201ENST00000445182 886 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RPL34P22-201ENST00000468193 318 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SL392P-201ENST00000473024 299 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC009108.1-201ENST00000473913 796 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ACTG1P20-201ENST00000486001 468 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 RPL17P2-201ENST00000491913 451 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC021220.1-201ENST00000507445 630 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC122713.1-201ENST00000518368 1015 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ATP5J2P4-201ENST00000538774 267 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ACTG1P15-201ENST00000570019 1063 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms