Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RN7SL42P-201ENST00000579786 294 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 GMCL1P2-201ENST00000605230 823 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AL022238.3-201ENST00000609279 443 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AL445647.2-201ENST00000615170 130 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AL591848.4-201ENST00000567832 3472 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AC009779.8-201ENST00000641684 4384 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 NEK2P4-201ENST00000425793 1329 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AL512310.3-201ENST00000547023 1335 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 SNX18P3-202ENST00000565670 1750 ntBASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGB1P1B2RPK0 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC018628.1-201ENST00000624147 3819 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC087045.3-201ENST00000623046 2468 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 PARP4P1-201ENST00000435945 2337 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 FO393411.1-201ENST00000325612 420 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AL034372.1-201ENST00000407586 754 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC006455.7-201ENST00000422502 392 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 GAPDHP57-201ENST00000424400 585 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AF241728.1-201ENST00000432359 1180 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 RPL4P2-201ENST00000447259 1282 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AL355076.1-201ENST00000484315 270 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 BX293995.1-201ENST00000502880 755 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AP000859.1-201ENST00000525536 307 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 OR4A21P-201ENST00000532759 944 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC092375.1-201ENST00000550410 637 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 BX649601.1-201ENST00000608264 572 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC117490.2-201ENST00000610042 594 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC012488.1-201ENST00000611221 640 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC025262.3-201ENST00000623666 360 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC027176.3-201ENST00000624460 586 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC007485.2-201ENST00000623493 1667 ntBASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGB1P1B2RPK0 AC020633.1-201ENST00000468439 2247 ntBASIC7.21□□□□□ -1.25
HMGB1P1B2RPK0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
HMGB1P1B2RPK0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
HMGB1P1B2RPK0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
HMGB1P1B2RPK0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 RNA5SP78-201ENST00000364622 118 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 RNU6-1055P-201ENST00000391085 107 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC074033.1-201ENST00000418623 410 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AL451136.1-201ENST00000435399 325 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC012501.2-201ENST00000437634 1281 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 ASS1P4-201ENST00000439462 1234 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC105918.1-201ENST00000474399 838 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 RN7SL65P-201ENST00000485221 315 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 KLF7P1-201ENST00000490941 1048 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 AC018442.3-201ENST00000523025 183 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 OR6M3P-201ENST00000531567 700 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 OR7E87P-201ENST00000532397 929 ntBASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGB1P1B2RPK0 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms