Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGA1P17096 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 RAB28P4-201ENST00000622233 665 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 AC068213.1-201ENST00000625124 226 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGA1P17096 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
HMGA1P17096 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 AL451064.2-201ENST00000623514 1654 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 AC104837.1-201ENST00000444644 1587 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HMGA1P17096 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HMGA1P17096 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGA1P17096 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HMGA1P17096 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 AL359396.1-201ENST00000623151 2376 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 RPL24P4-201ENST00000326586 421 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 AL773545.3-201ENST00000414297 706 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.11□□□□□ -1.27
HMGA1P17096 MTND6P1-201ENST00000417434 424 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AKR1B10P1-201ENST00000425765 942 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 VN1R53P-201ENST00000429536 957 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGA1P17096 DNAJA1P6-201ENST00000437347 354 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGA1P17096 PFN1P11-201ENST00000445829 389 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 DEFA11P-201ENST00000446470 261 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 RPS18P1-201ENST00000447840 458 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 OR52E7P-201ENST00000452394 933 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGA1P17096 RN7SL569P-201ENST00000494652 288 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGA1P17096 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.11□□□□□ -1.27
HMGA1P17096 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.11□□□□□ -1.27
HMGA1P17096 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGA1P17096 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.11□□□□□ -1.27
HMGA1P17096 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGA1P17096 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AL596275.2-207ENST00000641188 675 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AL354702.2-202ENST00000641481 890 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 AC073065.1-201ENST00000411678 2866 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 UGT2B25P-201ENST00000511504 1586 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 FLJ42393-201ENST00000623801 2270 ntBASIC7.11□□□□□ -1.27
HMGA1P17096 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
HMGA1P17096 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGA1P17096 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.1□□□□□ -1.27
HMGA1P17096 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HMGA1P17096 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.1□□□□□ -1.27
HMGA1P17096 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 NPM1P23-201ENST00000440193 849 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms