Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF549Q6P9A3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 RN7SKP55-201ENST00000364888 307 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 RN7SKP47-201ENST00000365347 328 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 CR391992.1-201ENST00000438601 394 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 BX323845.2-201ENST00000458382 234 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AL591122.1-201ENST00000487348 492 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC100854.1-201ENST00000520351 341 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 IGLVV-66-201ENST00000523818 341 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 OR5BK1P-201ENST00000550421 823 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC024614.1-201ENST00000577546 307 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AL035417.2-201ENST00000603887 796 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 MIR6731-201ENST00000614863 72 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 pRNA.9-201ENST00000618609 89 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AL049541.2-201ENST00000626377 555 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AP005139.1-201ENST00000580702 1647 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF549Q6P9A3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AL031651.1-201ENST00000615357 1438 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 RNU1-24P-201ENST00000364285 165 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 NFU1P1-201ENST00000413128 774 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC010878.1-201ENST00000456500 1047 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC083806.1-201ENST00000468934 316 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AP001646.2-201ENST00000528645 1156 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AL591767.3-201ENST00000554632 525 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AP006587.6-201ENST00000582128 1091 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 RN7SL697P-201ENST00000582484 299 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC011193.2-201ENST00000582638 367 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC020765.1-201ENST00000604296 328 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 MIR6829-201ENST00000620375 67 ntBASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms