Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 MIR191-201ENST00000384873 92 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC026310.1-201ENST00000396004 378 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 GSTA6P-201ENST00000424144 582 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 PSMA6P2-201ENST00000457574 686 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 RN7SL70P-201ENST00000478322 302 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AL356019.2-201ENST00000556738 3829 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 OR4C49P-201ENST00000563891 900 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 AL121583.1-201ENST00000612444 682 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 AC127071.2-201ENST00000623293 527 ntBASIC8.22□□□□□ -1.09
HLA-DOAP06340 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-DOAP06340 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HLA-DOAP06340 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
HLA-DOAP06340 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-DOAP06340 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-DOAP06340 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.21□□□□□ -1.09
HLA-DOAP06340 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-DOAP06340 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.21□□□□□ -1.09
HLA-DOAP06340 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HLA-DOAP06340 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.21□□□□□ -1.09
HLA-DOAP06340 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AL590762.1-201ENST00000391782 432 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 HSPE1P27-201ENST00000430808 296 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 SUMO2P8-201ENST00000434672 286 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AL445991.1-201ENST00000450381 475 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 NMNAT1P3-201ENST00000457517 888 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AL049829.1-201ENST00000465411 156 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC005165.2-201ENST00000466070 380 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC055733.3-201ENST00000505214 523 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC084851.2-201ENST00000530377 364 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 NXPE2P1-201ENST00000543705 726 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 RPL7AP69-201ENST00000595306 806 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 MIR6889-201ENST00000613185 59 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC022960.2-201ENST00000616300 666 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 AC002044.3-201ENST00000623314 541 ntBASIC8.21□□□□□ -1.1
HLA-DOAP06340 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HLA-DOAP06340 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.21□□□□□ -1.1
HLA-DOAP06340 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC8.2□□□□□ -1.1
HLA-DOAP06340 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.2□□□□□ -1.1
HLA-DOAP06340 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.2□□□□□ -1.1
HLA-DOAP06340 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HLA-DOAP06340 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms