Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 USP9YP3-201ENST00000434481 1766 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 OR2M1P-201ENST00000318104 951 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 RPL19P21-201ENST00000424919 591 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 PSMA6P2-201ENST00000457574 686 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 RN7SL702P-201ENST00000488394 292 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 SNORA70.23-201ENST00000517218 151 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC068631.3-201ENST00000538831 225 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 DCN-207ENST00000546370 586 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 OR4N3P-201ENST00000559395 818 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC063923.2-201ENST00000562158 928 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 MRPS21P9-201ENST00000571150 257 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 OR5AH1P-201ENST00000595968 283 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC010719.1-201ENST00000602992 747 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC097641.3-201ENST00000613523 464 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 MIR6754-201ENST00000621121 66 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC135068.4-201ENST00000622949 925 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC127071.1-201ENST00000624997 712 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 PARP4P1-201ENST00000435945 2337 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 AC139426.3-201ENST00000605648 2059 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 DDX50P1-201ENST00000438163 2400 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 MAPK10-379ENST00000642013 1385 ntBASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.66□□□□□ -1.5
RCL1Q9Y2P8 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 DDX10P2-201ENST00000417796 2614 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 MKI67P1-201ENST00000604297 1460 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 VEZF1P1-201ENST00000423931 1541 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 PPCS-204ENST00000372562 966 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 RNU4-64P-201ENST00000410795 131 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AL122003.1-201ENST00000435206 784 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 AC245047.6-201ENST00000445444 617 ntBASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.65□□□□□ -1.5
RCL1Q9Y2P8 RPSAP7-201ENST00000456871 885 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms