Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
APOEP02649 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.39□□□□□ -1.23
APOEP02649 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
APOEP02649 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
APOEP02649 RNA5SP114-201ENST00000363780 113 ntBASIC7.39□□□□□ -1.23
APOEP02649 RN7SKP55-201ENST00000364888 307 ntBASIC7.39□□□□□ -1.23
APOEP02649 AL139135.1-201ENST00000412675 209 ntBASIC7.39□□□□□ -1.23
APOEP02649 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.39□□□□□ -1.23
APOEP02649 MTND1P10-201ENST00000426108 832 ntBASIC7.39□□□□□ -1.23
APOEP02649 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
APOEP02649 AL645936.2-201ENST00000430565 928 ntBASIC7.39□□□□□ -1.23
APOEP02649 AL354983.1-201ENST00000434580 906 ntBASIC7.39□□□□□ -1.23
APOEP02649 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.39□□□□□ -1.23
APOEP02649 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.39□□□□□ -1.23
APOEP02649 PRDX1P1-201ENST00000449329 596 ntBASIC7.39□□□□□ -1.23
APOEP02649 AL390728.3-201ENST00000452704 270 ntBASIC7.39□□□□□ -1.23
APOEP02649 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
APOEP02649 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.39□□□□□ -1.23
APOEP02649 SNORA81.1-201ENST00000458922 177 ntBASIC7.39□□□□□ -1.23
APOEP02649 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.39□□□□□ -1.23
APOEP02649 CBX5P1-201ENST00000468470 561 ntBASIC7.39□□□□□ -1.23
APOEP02649 RPL21P42-201ENST00000488408 464 ntBASIC7.39□□□□□ -1.23
APOEP02649 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.39□□□□□ -1.23
APOEP02649 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.39□□□□□ -1.23
APOEP02649 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.39□□□□□ -1.23
APOEP02649 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.39□□□□□ -1.23
APOEP02649 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.39□□□□□ -1.23
APOEP02649 AC122710.3-201ENST00000606566 541 ntBASIC7.39□□□□□ -1.23
APOEP02649 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 AL049541.2-201ENST00000626377 555 ntBASIC7.39□□□□□ -1.23
APOEP02649 AL139254.2-202ENST00000641937 1156 ntBASIC7.39□□□□□ -1.23
APOEP02649 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.39□□□□□ -1.23
APOEP02649 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
APOEP02649 AC092821.2-201ENST00000545710 2042 ntBASIC7.39□□□□□ -1.23
APOEP02649 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 AC079178.2-201ENST00000439323 1624 ntBASIC7.38□□□□□ -1.23
APOEP02649 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 AL358913.2-201ENST00000553881 1548 ntBASIC7.38□□□□□ -1.23
APOEP02649 AL356361.1-201ENST00000400943 1459 ntBASIC7.38□□□□□ -1.23
APOEP02649 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.38□□□□□ -1.23
APOEP02649 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 RN7SKP107-201ENST00000364157 290 ntBASIC7.38□□□□□ -1.23
APOEP02649 RNA5SP302-201ENST00000364896 100 ntBASIC7.38□□□□□ -1.23
APOEP02649 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 AC006511.2-201ENST00000388966 660 ntBASIC7.38□□□□□ -1.23
APOEP02649 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
APOEP02649 RNA5SP53-201ENST00000391299 120 ntBASIC7.38□□□□□ -1.23
APOEP02649 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
APOEP02649 AC008753.1-201ENST00000423096 284 ntBASIC7.38□□□□□ -1.23
APOEP02649 AC092646.1-201ENST00000427142 901 ntBASIC7.38□□□□□ -1.23
APOEP02649 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 RPS7P4-201ENST00000444127 582 ntBASIC7.38□□□□□ -1.23
APOEP02649 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 AC005517.1-201ENST00000452091 489 ntBASIC7.38□□□□□ -1.23
APOEP02649 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.38□□□□□ -1.23
APOEP02649 SRP68P2-201ENST00000456184 254 ntBASIC7.38□□□□□ -1.23
APOEP02649 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 RPL7AP30-201ENST00000482859 796 ntBASIC7.38□□□□□ -1.23
APOEP02649 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 AP001803.1-201ENST00000525668 147 ntBASIC7.38□□□□□ -1.23
APOEP02649 AL365223.1-201ENST00000574864 1297 ntBASIC7.38□□□□□ -1.23
APOEP02649 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
APOEP02649 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 AC009283.1-201ENST00000615852 645 ntBASIC7.38□□□□□ -1.23
APOEP02649 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms