Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC2P18074 AL117339.4-201ENST00000608335 7063 ntBASIC7.21□□□□□ -1.26
ERCC2P18074 AL021877.2-201ENST00000624442 10684 ntBASIC7.21□□□□□ -1.26
ERCC2P18074 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC2P18074 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.21□□□□□ -1.26
ERCC2P18074 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.21□□□□□ -1.26
ERCC2P18074 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
ERCC2P18074 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.21□□□□□ -1.26
ERCC2P18074 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC2P18074 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 U3.48-201ENST00000363172 216 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC2P18074 RPL9P21-201ENST00000392269 505 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 AL662791.3-201ENST00000413771 776 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 RN7SL456P-201ENST00000469290 295 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 EEF1B2P2-201ENST00000519625 676 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 IGLVV-66-201ENST00000523818 341 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.2□□□□□ -1.26
ERCC2P18074 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.2□□□□□ -1.26
ERCC2P18074 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.2□□□□□ -1.26
ERCC2P18074 FAM30C-201ENST00000561158 410 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.2□□□□□ -1.26
ERCC2P18074 AL139317.4-201ENST00000605879 760 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.2□□□□□ -1.26
ERCC2P18074 AL121782.1-201ENST00000611242 413 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC012629.3-201ENST00000623397 328 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AC034229.6-201ENST00000623704 224 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 AC093909.6-201ENST00000624757 775 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC2P18074 CTAGE11P-201ENST00000451540 2353 ntBASIC7.2□□□□□ -1.26
ERCC2P18074 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC2P18074 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC2P18074 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC2P18074 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.19□□□□□ -1.26
ERCC2P18074 AC129502.1-201ENST00000623261 1654 ntBASIC7.19□□□□□ -1.26
ERCC2P18074 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 MRPS17P1-201ENST00000596009 3130 ntBASIC7.19□□□□□ -1.26
ERCC2P18074 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
ERCC2P18074 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC2P18074 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC2P18074 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 RNU12-2P-201ENST00000364789 156 ntBASIC7.19□□□□□ -1.26
ERCC2P18074 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC2P18074 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms