Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 SLC25A51P2-201ENST00000535708 889 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AL121809.2-201ENST00000613169 341 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AP005212.4-201ENST00000614206 710 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC022743.1-201ENST00000624990 664 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AC073488.7-201ENST00000633785 778 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 KARSP2-201ENST00000415696 1639 ntBASIC8.62□□□□□ -1.03
CHMP4CQ96CF2 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL138479.1-201ENST00000426913 484 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL731892.1-201ENST00000437364 1192 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC079781.1-201ENST00000441505 394 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL158214.1-201ENST00000444423 404 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 GAPDHP16-201ENST00000448152 962 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 RPS10P28-201ENST00000480396 498 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC112225.1-201ENST00000508230 297 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC146944.3-201ENST00000509969 371 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 LINC01085-203ENST00000511195 326 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 RNU6-551P-201ENST00000516661 103 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 MIR3135A-201ENST00000578460 77 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC005070.2-201ENST00000604391 260 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AL355333.1-201ENST00000605632 279 ntBASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHMP4CQ96CF2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 MIR138-2-201ENST00000384916 84 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 MIR27A-201ENST00000385073 78 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 RN7SKP117-201ENST00000410175 264 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 CYCSP44-201ENST00000448560 313 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 RN7SL251P-201ENST00000464175 297 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC073648.3-201ENST00000504939 925 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC017007.1-201ENST00000511960 415 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms