Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 GTF2F2P2-201ENST00000445825 721 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 TCEAL4P1-201ENST00000453620 588 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 RN7SL213P-201ENST00000463482 317 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 RPS4XP23-201ENST00000487801 237 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC097263.1-201ENST00000496795 606 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 LINC01085-203ENST00000511195 326 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AL136298.2-201ENST00000556497 1570 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC010463.3-201ENST00000594077 500 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 RPS28P1-201ENST00000604589 187 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 MIR6732-201ENST00000619365 60 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC083806.2-201ENST00000617795 2685 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 FUNDC2P3-201ENST00000334716 533 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 MIR199B-201ENST00000384849 110 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC068138.1-201ENST00000412635 217 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 RPL17P17-201ENST00000419491 557 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AL591379.2-201ENST00000450223 397 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ATP5G1P6-201ENST00000451206 412 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 RPL7P17-201ENST00000470927 724 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC139272.1-201ENST00000505516 640 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC068631.3-201ENST00000538831 225 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ULK4P3-201ENST00000563895 440 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ULK4P1-202ENST00000565174 503 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 BOLA2P1-201ENST00000584794 232 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC068802.1-201ENST00000603420 732 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC241377.2-202ENST00000636462 997 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AL117378.2-201ENST00000622916 1337 ntBASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.47□□□□□ -1.21
CCDC50Q8IVM0 AC130456.1-201ENST00000565085 1363 ntBASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 AC010168.2-201ENST00000562691 5428 ntBASIC7.46□□□□□ -1.21
CCDC50Q8IVM0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 RNU1-38P-201ENST00000362817 144 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms