Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC4.89□□□□□ -1.63
RPL39P62891 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC4.89□□□□□ -1.63
RPL39P62891 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC4.89□□□□□ -1.63
RPL39P62891 RPL35AP25-201ENST00000584631 330 ntBASIC4.89□□□□□ -1.63
RPL39P62891 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC4.89□□□□□ -1.63
RPL39P62891 RPSAP66-201ENST00000592196 606 ntBASIC4.89□□□□□ -1.63
RPL39P62891 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 OR5AH1P-201ENST00000595968 283 ntBASIC4.89□□□□□ -1.63
RPL39P62891 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC4.89□□□□□ -1.63
RPL39P62891 AC135050.6-202ENST00000613584 392 ntBASIC4.89□□□□□ -1.63
RPL39P62891 AC120057.5-201ENST00000623840 154 ntBASIC4.89□□□□□ -1.63
RPL39P62891 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 AC093278.2-201ENST00000564956 2485 ntBASIC4.89□□□□□ -1.63
RPL39P62891 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 AC093829.1-201ENST00000506662 1618 ntBASIC4.88□□□□□ -1.63
RPL39P62891 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPL39P62891 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 RN7SKP76-201ENST00000364419 323 ntBASIC4.88□□□□□ -1.63
RPL39P62891 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPL39P62891 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 RN7SKP254-201ENST00000410685 310 ntBASIC4.88□□□□□ -1.63
RPL39P62891 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC4.88□□□□□ -1.63
RPL39P62891 AL713922.1-201ENST00000416477 747 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC4.88□□□□□ -1.63
RPL39P62891 AL627308.2-201ENST00000420014 432 ntBASIC4.88□□□□□ -1.63
RPL39P62891 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 AL451136.1-201ENST00000435399 325 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC4.88□□□□□ -1.63
RPL39P62891 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC4.88□□□□□ -1.63
RPL39P62891 RPS18P13-201ENST00000461260 454 ntBASIC4.88□□□□□ -1.63
RPL39P62891 RN7SL702P-201ENST00000488394 292 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC008040.4-201ENST00000494834 768 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC4.88□□□□□ -1.63
RPL39P62891 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC4.88□□□□□ -1.63
RPL39P62891 AC011352.2-201ENST00000514574 1016 ntBASIC4.88□□□□□ -1.63
RPL39P62891 IGLV10-67-201ENST00000519446 325 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC4.88□□□□□ -1.63
RPL39P62891 GLYATL1P4-201ENST00000529326 906 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AL135978.1-201ENST00000553618 1266 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC4.88□□□□□ -1.63
RPL39P62891 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC4.88□□□□□ -1.63
RPL39P62891 MIR4301-201ENST00000577203 66 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 AC090699.1-201ENST00000586264 321 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC108451.2-201ENST00000603875 538 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AC008385.1-201ENST00000604421 355 ntBASIC4.88□□□□□ -1.63
RPL39P62891 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AL445647.2-201ENST00000615170 130 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 PFN1P2-202ENST00000621347 397 ntBASIC4.88□□□□□ -1.63
RPL39P62891 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 AC016582.3-206ENST00000636547 207 ntBASIC4.88□□□□□ -1.63
RPL39P62891 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 MAPK10-379ENST00000642013 1385 ntBASIC4.88□□□□□ -1.63
RPL39P62891 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 FADS2P1-201ENST00000611807 1446 ntBASIC4.88□□□□□ -1.63
RPL39P62891 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC4.88□□□□□ -1.63
RPL39P62891 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPL39P62891 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
RPL39P62891 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 AL136298.2-201ENST00000556497 1570 ntBASIC4.87□□□□□ -1.63
RPL39P62891 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 ZNF658B-201ENST00000602828 3408 ntBASIC4.87□□□□□ -1.63
RPL39P62891 OR6M2P-202ENST00000641780 2063 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms