Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MTND6P1-201ENST00000417434 424 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 RPL7P7-201ENST00000428803 703 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 EFCAB14P1-201ENST00000442409 463 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC063943.2-201ENST00000495697 534 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC008496.1-201ENST00000509131 295 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 GAPDHP31-201ENST00000509325 1014 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 RNA5SP116-201ENST00000516132 98 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 DPPA3P2-202ENST00000557188 1219 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC244034.2-201ENST00000562504 509 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 RN7SL376P-201ENST00000578594 264 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC010719.1-201ENST00000602992 747 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AL137190.1-201ENST00000603288 282 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC026951.2-201ENST00000613847 241 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 MIR6761-201ENST00000617899 72 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 uc_338.21-201ENST00000622458 147 ntBASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC71LQ8N9Z2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 AC139426.3-201ENST00000605648 2059 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 AC010401.2-201ENST00000575137 4934 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 DDX43P1-201ENST00000510713 1763 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 DDX10P2-201ENST00000417796 2614 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 RBMY1A3P-201ENST00000382670 1404 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 AC083806.2-201ENST00000617795 2685 ntBASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC71LQ8N9Z2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 RPL10P16-201ENST00000325000 645 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC073900.1-201ENST00000429766 776 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC007000.1-201ENST00000453064 794 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 FTH1P8-201ENST00000498161 514 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC011611.6-201ENST00000547483 255 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC009171.1-201ENST00000572673 266 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 RN7SL835P-201ENST00000579920 262 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 GTF2IP6-201ENST00000583143 541 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 OR13Z2P-201ENST00000606338 555 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC063962.1-201ENST00000608199 521 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 CR589904.1-203ENST00000636515 318 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 MFSD8-234ENST00000641503 1082 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 DOCK11P1-201ENST00000553480 5932 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 AL358913.2-201ENST00000553881 1548 ntBASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC71LQ8N9Z2 UGT2B27P-201ENST00000505092 1620 ntBASIC5.88□□□□□ -1.47
CCDC71LQ8N9Z2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71LQ8N9Z2 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71LQ8N9Z2 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms