Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 FAM27E3-202ENST00000614611 340 ntBASIC6.57□□□□□ -1.36
SSX4O60224 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.57□□□□□ -1.36
SSX4O60224 AC010653.3-201ENST00000635332 232 ntBASIC6.57□□□□□ -1.36
SSX4O60224 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 AC034229.2-201ENST00000566945 2508 ntBASIC6.57□□□□□ -1.36
SSX4O60224 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.57□□□□□ -1.36
SSX4O60224 AC027313.1-201ENST00000509159 1666 ntBASIC6.57□□□□□ -1.36
SSX4O60224 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SSX4O60224 AC090643.1-201ENST00000623600 3100 ntBASIC6.57□□□□□ -1.36
SSX4O60224 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SSX4O60224 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX4O60224 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX4O60224 AC007998.4-201ENST00000612496 2533 ntBASIC6.56□□□□□ -1.36
SSX4O60224 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 QRSL1P3-201ENST00000552666 1316 ntBASIC6.56□□□□□ -1.36
SSX4O60224 OLMALINC-203ENST00000641087 3779 ntBASIC6.56□□□□□ -1.36
SSX4O60224 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX4O60224 RNA5SP442-201ENST00000365050 107 ntBASIC6.56□□□□□ -1.36
SSX4O60224 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX4O60224 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX4O60224 AC092042.2-201ENST00000417304 331 ntBASIC6.56□□□□□ -1.36
SSX4O60224 PGAM1P3-201ENST00000420790 565 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX4O60224 DDX11L10-201ENST00000430178 571 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX4O60224 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX4O60224 RPL5P4-201ENST00000434805 886 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX4O60224 AC239800.1-201ENST00000442049 719 ntBASIC6.56□□□□□ -1.36
SSX4O60224 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX4O60224 AL591379.2-201ENST00000450223 397 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AL357037.1-201ENST00000454758 322 ntBASIC6.56□□□□□ -1.36
SSX4O60224 RN7SL325P-201ENST00000460434 283 ntBASIC6.56□□□□□ -1.36
SSX4O60224 RN7SL861P-201ENST00000473793 285 ntBASIC6.56□□□□□ -1.36
SSX4O60224 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX4O60224 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX4O60224 AC006070.1-201ENST00000508151 193 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX4O60224 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.56□□□□□ -1.36
SSX4O60224 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 AC115989.2-201ENST00000578640 563 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AC079414.3-201ENST00000612986 1090 ntBASIC6.56□□□□□ -1.36
SSX4O60224 BX005195.1-201ENST00000618097 1198 ntBASIC6.56□□□□□ -1.36
SSX4O60224 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.56□□□□□ -1.36
SSX4O60224 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 AC093829.1-201ENST00000506662 1618 ntBASIC6.56□□□□□ -1.36
SSX4O60224 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.56□□□□□ -1.36
SSX4O60224 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 AC092646.2-201ENST00000431242 2095 ntBASIC6.56□□□□□ -1.36
SSX4O60224 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX4O60224 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SSX4O60224 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX4O60224 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 FOLH1B-202ENST00000529567 2145 ntBASIC6.55□□□□□ -1.36
SSX4O60224 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.55□□□□□ -1.36
SSX4O60224 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.55□□□□□ -1.36
SSX4O60224 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSX4O60224 RNU1-24P-201ENST00000364285 165 ntBASIC6.55□□□□□ -1.36
SSX4O60224 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.55□□□□□ -1.36
SSX4O60224 RNU6-167P-201ENST00000384292 106 ntBASIC6.55□□□□□ -1.36
SSX4O60224 SNORA10B-201ENST00000384458 133 ntBASIC6.55□□□□□ -1.36
SSX4O60224 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms