Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm11643-201ENSMUST00000119578 864 ntBASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm30025-201ENSMUST00000218555 728 ntBASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl40Q9Z2Q5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl40Q9Z2Q5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl40Q9Z2Q5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl40Q9Z2Q5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Mir6349-201ENSMUST00000184059 97 ntBASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl40Q9Z2Q5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm6433-201ENSMUST00000118634 875 ntBASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl40Q9Z2Q5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl40Q9Z2Q5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms