Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 FAM21FP-204ENST00000608637 956 ntBASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.57■□□□□ 0.24
LIN7CQ9NUP9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AC080038.1-201ENST00000611274 1154 ntBASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AC013268.1-206ENST00000638368 961 ntBASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 AC112229.1-201ENST00000639295 961 ntBASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 DPP3P2-201ENST00000416030 1696 ntBASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIN7CQ9NUP9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 RBM17P2-201ENST00000616397 1405 ntBASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 TERF1P5-201ENST00000477545 1207 ntBASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 AC231657.2-201ENST00000624556 255 ntBASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIN7CQ9NUP9 KRT8P36-201ENST00000489121 1440 ntBASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms