Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 PMP2YEL017C-A 132 nt-1.55□□□□□ -2.66
TY1B-DR3Q99231 snR74snR74 88 nt-1.56□□□□□ -2.66
TY1B-DR3Q99231 YOR121CYOR121C 306 nt-1.56□□□□□ -2.66
TY1B-DR3Q99231 YFL012WYFL012W 447 nt-1.57□□□□□ -2.66
TY1B-DR3Q99231 YBL071CYBL071C 309 nt-1.57□□□□□ -2.66
TY1B-DR3Q99231 CBS1YDL069C 690 nt-1.58□□□□□ -2.66
TY1B-DR3Q99231 snR9snR9 187 nt-1.59□□□□□ -2.66
TY1B-DR3Q99231 VPS20YMR077C 666 nt-1.62□□□□□ -2.67
TY1B-DR3Q99231 YER090C-AYER090C-A 90 nt-1.63□□□□□ -2.67
TY1B-DR3Q99231 YLR456WYLR456W 615 nt-1.63□□□□□ -2.67
TY1B-DR3Q99231 YEL020C-BYEL020C-B 198 nt-1.64□□□□□ -2.67
TY1B-DR3Q99231 YHR125WYHR125W 306 nt-1.64□□□□□ -2.67
TY1B-DR3Q99231 JLP2YMR132C 627 nt-1.64□□□□□ -2.67
TY1B-DR3Q99231 snR77snR77 88 nt-1.64□□□□□ -2.67
TY1B-DR3Q99231 YJL077W-AYJL077W-A 87 nt-1.66□□□□□ -2.68
TY1B-DR3Q99231 CDC65tQ(CUG)M 72 nt-1.67□□□□□ -2.68
TY1B-DR3Q99231 YKL044WYKL044W 321 nt-1.67□□□□□ -2.68
TY1B-DR3Q99231 PRM3YPL192C 402 nt-1.67□□□□□ -2.68
TY1B-DR3Q99231 YBR126W-BYBR126W-B 144 nt-1.67□□□□□ -2.68
TY1B-DR3Q99231 BI2Q0110 1272 nt-1.67□□□□□ -2.68
TY1B-DR3Q99231 TOM22YNL131W 459 nt-1.68□□□□□ -2.68
TY1B-DR3Q99231 YIR021W-AYIR021W-A 213 nt-1.7□□□□□ -2.68
TY1B-DR3Q99231 YPR016W-AYPR016W-A 261 nt-1.7□□□□□ -2.68
TY1B-DR3Q99231 tQ(UUG)QtQ(UUG)Q 76 nt-1.71□□□□□ -2.68
TY1B-DR3Q99231 YAF9YNL107W 681 nt-1.72□□□□□ -2.69
TY1B-DR3Q99231 GPI15YNL038W 690 nt-1.73□□□□□ -2.69
TY1B-DR3Q99231 CSE2YNR010W 450 nt-1.73□□□□□ -2.69
TY1B-DR3Q99231 YNL266WYNL266W 420 nt-1.74□□□□□ -2.69
TY1B-DR3Q99231 YDR544CYDR544C 429 nt-1.75□□□□□ -2.69
TY1B-DR3Q99231 YGR069WYGR069W 336 nt-1.75□□□□□ -2.69
TY1B-DR3Q99231 YNL205CYNL205C 423 nt-1.75□□□□□ -2.69
TY1B-DR3Q99231 YLL019W-AYLL019W-A 93 nt-1.76□□□□□ -2.69
TY1B-DR3Q99231 YOR293C-AYOR293C-A 150 nt-1.77□□□□□ -2.69
TY1B-DR3Q99231 RPS27BYHR021C 249 nt-1.77□□□□□ -2.69
TY1B-DR3Q99231 YOL166W-AYOL166W-A 156 nt-1.77□□□□□ -2.69
TY1B-DR3Q99231 YBL039C-AYBL039C-A 84 nt-1.78□□□□□ -2.69
TY1B-DR3Q99231 RDS3YPR094W 324 nt-1.79□□□□□ -2.7
TY1B-DR3Q99231 YGR240C-AYGR240C-A 201 nt-1.81□□□□□ -2.7
TY1B-DR3Q99231 YLR202CYLR202C 327 nt-1.81□□□□□ -2.7
TY1B-DR3Q99231 YMR193C-AYMR193C-A 387 nt-1.82□□□□□ -2.7
TY1B-DR3Q99231 YOR314W-AYOR314W-A 111 nt-1.84□□□□□ -2.7
TY1B-DR3Q99231 YDL016CYDL016C 303 nt-1.85□□□□□ -2.7
TY1B-DR3Q99231 YGR174W-AYGR174W-A 87 nt-1.85□□□□□ -2.71
TY1B-DR3Q99231 YIL029CYIL029C 429 nt-1.85□□□□□ -2.71
TY1B-DR3Q99231 PCC1YKR095W-A 267 nt-1.86□□□□□ -2.71
TY1B-DR3Q99231 YGL149WYGL149W 306 nt-1.87□□□□□ -2.71
TY1B-DR3Q99231 snR39BsnR39B 96 nt-1.87□□□□□ -2.71
TY1B-DR3Q99231 snR50snR50 90 nt-1.89□□□□□ -2.71
TY1B-DR3Q99231 YAR047CYAR047C 321 nt-1.9□□□□□ -2.71
TY1B-DR3Q99231 YML054C-AYML054C-A 159 nt-1.9□□□□□ -2.71
TY1B-DR3Q99231 YIL115W-AYIL115W-A 372 nt-1.92□□□□□ -2.72
TY1B-DR3Q99231 YLR269CYLR269C 351 nt-1.93□□□□□ -2.72
TY1B-DR3Q99231 YJL197C-AYJL197C-A 282 nt-1.95□□□□□ -2.72
TY1B-DR3Q99231 YDR543CYDR543C 300 nt-1.98□□□□□ -2.73
TY1B-DR3Q99231 YAL068W-AYAL068W-A 255 nt-1.98□□□□□ -2.73
TY1B-DR3Q99231 YDR048CYDR048C 315 nt-2□□□□□ -2.73
TY1B-DR3Q99231 snR67snR67 82 nt-2.02□□□□□ -2.73
TY1B-DR3Q99231 EAF6YJR082C 342 nt-2.02□□□□□ -2.73
TY1B-DR3Q99231 snR69snR69 101 nt-2.03□□□□□ -2.73
TY1B-DR3Q99231 YMR315W-AYMR315W-A 108 nt-2.03□□□□□ -2.73
TY1B-DR3Q99231 YDR102CYDR102C 333 nt-2.03□□□□□ -2.73
TY1B-DR3Q99231 Q0142Q0142 177 nt-2.03□□□□□ -2.73
TY1B-DR3Q99231 YOR309CYOR309C 381 nt-2.04□□□□□ -2.74
TY1B-DR3Q99231 YER137W-AYER137W-A 306 nt-2.05□□□□□ -2.74
TY1B-DR3Q99231 YOR072W-BYOR072W-B 162 nt-2.05□□□□□ -2.74
TY1B-DR3Q99231 YBR182C-AYBR182C-A 195 nt-2.05□□□□□ -2.74
TY1B-DR3Q99231 YLR342W-AYLR342W-A 174 nt-2.07□□□□□ -2.74
TY1B-DR3Q99231 YMR172C-AYMR172C-A 384 nt-2.07□□□□□ -2.74
TY1B-DR3Q99231 YML099W-AYML099W-A 330 nt-2.08□□□□□ -2.74
TY1B-DR3Q99231 HMRA1YCR097W 381 nt-2.09□□□□□ -2.74
TY1B-DR3Q99231 YKL063CYKL063C 504 nt-2.1□□□□□ -2.75
TY1B-DR3Q99231 YOR008C-AYOR008C-A 225 nt-2.1□□□□□ -2.75
TY1B-DR3Q99231 YBR196C-AYBR196C-A 150 nt-2.11□□□□□ -2.75
TY1B-DR3Q99231 YLR412C-AYLR412C-A 207 nt-2.12□□□□□ -2.75
TY1B-DR3Q99231 tD(GUC)QtD(GUC)Q 75 nt-2.13□□□□□ -2.75
TY1B-DR3Q99231 snR54snR54 86 nt-2.13□□□□□ -2.75
TY1B-DR3Q99231 MPC1YGL080W 393 nt-2.15□□□□□ -2.75
TY1B-DR3Q99231 YDL158CYDL158C 309 nt-2.16□□□□□ -2.76
TY1B-DR3Q99231 YER097WYER097W 330 nt-2.17□□□□□ -2.76
TY1B-DR3Q99231 YFL019CYFL019C 354 nt-2.18□□□□□ -2.76
TY1B-DR3Q99231 YOR376W-AYOR376W-A 156 nt-2.21□□□□□ -2.76
TY1B-DR3Q99231 YFL032WYFL032W 321 nt-2.22□□□□□ -2.76
TY1B-DR3Q99231 CSN9YDR179C 489 nt-2.23□□□□□ -2.77
TY1B-DR3Q99231 YPR197CYPR197C 564 nt-2.24□□□□□ -2.77
TY1B-DR3Q99231 YER006C-AYER006C-A 318 nt-2.26□□□□□ -2.77
TY1B-DR3Q99231 YGR146C-AYGR146C-A 162 nt-2.26□□□□□ -2.77
TY1B-DR3Q99231 YOL013W-BYOL013W-B 291 nt-2.26□□□□□ -2.77
TY1B-DR3Q99231 YOL083C-AYOL083C-A 141 nt-2.27□□□□□ -2.77
TY1B-DR3Q99231 YDL159C-BYDL159C-B 177 nt-2.31□□□□□ -2.78
TY1B-DR3Q99231 YAL066WYAL066W 309 nt-2.32□□□□□ -2.78
TY1B-DR3Q99231 YLR286W-AYLR286W-A 135 nt-2.32□□□□□ -2.78
TY1B-DR3Q99231 YOR316C-AYOR316C-A 210 nt-2.33□□□□□ -2.78
TY1B-DR3Q99231 snR60snR60 104 nt-2.35□□□□□ -2.79
TY1B-DR3Q99231 YDR524W-CYDR524W-C 90 nt-2.35□□□□□ -2.79
TY1B-DR3Q99231 tM(CAU)Q2tM(CAU)Q2 78 nt-2.35□□□□□ -2.79
TY1B-DR3Q99231 YJR157WYJR157W 363 nt-2.35□□□□□ -2.79
TY1B-DR3Q99231 YNL028WYNL028W 318 nt-2.36□□□□□ -2.79
TY1B-DR3Q99231 YHR180C-BYHR180C-B 105 nt-2.37□□□□□ -2.79
TY1B-DR3Q99231 YJL047C-AYJL047C-A 135 nt-2.38□□□□□ -2.79
TY1B-DR3Q99231 ATP6Q0085 780 nt-2.38□□□□□ -2.79
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms