Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc12Q8K5B8 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.46□□□□□ -0.1
Hoxc12Q8K5B8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.46□□□□□ -0.1
Hoxc12Q8K5B8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc12Q8K5B8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Hoxc12Q8K5B8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Gm11539-201ENSMUST00000119837 557 ntBASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Gm13436-201ENSMUST00000120418 567 ntBASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc12Q8K5B8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Gm10231-201ENSMUST00000181584 441 ntBASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Gm10175-202ENSMUST00000208752 441 ntBASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc12Q8K5B8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Gm13401-201ENSMUST00000117074 291 ntBASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Gm24841-201ENSMUST00000158676 357 ntBASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc12Q8K5B8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms