Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 PAU12YGR294W 363 nt0.92□□□□□ -2.26
TOF1P53840 YLR282CYLR282C 342 nt0.92□□□□□ -2.26
TOF1P53840 YER053C-AYER053C-A 114 nt0.91□□□□□ -2.26
TOF1P53840 YIL002W-AYIL002W-A 210 nt0.91□□□□□ -2.26
TOF1P53840 PMP1YCR024C-A 123 nt0.9□□□□□ -2.27
TOF1P53840 COX5BYIL111W 456 nt0.9□□□□□ -2.27
TOF1P53840 YJL182CYJL182C 318 nt0.9□□□□□ -2.27
TOF1P53840 snR190snR190 190 nt0.9□□□□□ -2.27
TOF1P53840 YPR117WYPR117W 7470 nt0.9□□□□□ -2.27
TOF1P53840 UTP20YBL004W 7482 nt0.9□□□□□ -2.27
TOF1P53840 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
TOF1P53840 YKL100W-AYKL100W-A 90 nt0.88□□□□□ -2.27
TOF1P53840 YLR466C-BYLR466C-B 117 nt0.88□□□□□ -2.27
TOF1P53840 tF(GAA)BtF(GAA)B 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)FtF(GAA)F 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)GtF(GAA)G 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)H1tF(GAA)H1 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)H2tF(GAA)H2 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)MtF(GAA)M 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)P1tF(GAA)P1 73 nt0.87□□□□□ -2.27
TOF1P53840 tF(GAA)P2tF(GAA)P2 73 nt0.87□□□□□ -2.27
TOF1P53840 YIL142C-AYIL142C-A 333 nt0.87□□□□□ -2.27
TOF1P53840 YLR342W-AYLR342W-A 174 nt0.87□□□□□ -2.27
TOF1P53840 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
TOF1P53840 YML002WYML002W 2214 nt0.86□□□□□ -2.27
TOF1P53840 PRP39YML046W 1890 nt0.86□□□□□ -2.27
TOF1P53840 YEL073CYEL073C 324 nt0.85□□□□□ -2.27
TOF1P53840 YGL007C-AYGL007C-A 87 nt0.85□□□□□ -2.27
TOF1P53840 YGR151CYGR151C 336 nt0.85□□□□□ -2.27
TOF1P53840 Q0032Q0032 291 nt0.84□□□□□ -2.27
TOF1P53840 QCR9YGR183C 201 nt0.84□□□□□ -2.27
TOF1P53840 YOR225WYOR225W 330 nt0.84□□□□□ -2.27
TOF1P53840 PRP42YDR235W 1635 nt0.84□□□□□ -2.28
TOF1P53840 SEC8YPR055W 3198 nt0.84□□□□□ -2.28
TOF1P53840 FYV10YIL097W 1551 nt0.83□□□□□ -2.28
TOF1P53840 YLR041WYLR041W 321 nt0.83□□□□□ -2.28
TOF1P53840 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
TOF1P53840 YPR160W-AYPR160W-A 81 nt0.82□□□□□ -2.28
TOF1P53840 PRP5YBR237W 2550 nt0.81□□□□□ -2.28
TOF1P53840 UTP8YGR128C 2142 nt0.81□□□□□ -2.28
TOF1P53840 TRS65YGR166W 1683 nt0.81□□□□□ -2.28
TOF1P53840 YLR399W-AYLR399W-A 105 nt0.8□□□□□ -2.28
TOF1P53840 tN(GUU)QtN(GUU)Q 71 nt0.78□□□□□ -2.28
TOF1P53840 YNL338WYNL338W 159 nt0.77□□□□□ -2.29
TOF1P53840 YOR381W-AYOR381W-A 168 nt0.77□□□□□ -2.29
TOF1P53840 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
TOF1P53840 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
TOF1P53840 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
TOF1P53840 TAH1YCR060W 336 nt0.75□□□□□ -2.29
TOF1P53840 YGL182CYGL182C 324 nt0.75□□□□□ -2.29
TOF1P53840 YBL039C-AYBL039C-A 84 nt0.75□□□□□ -2.29
TOF1P53840 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
TOF1P53840 CHS6YJL099W 2241 nt0.74□□□□□ -2.29
TOF1P53840 YHR131W-AYHR131W-A 246 nt0.74□□□□□ -2.29
TOF1P53840 OST4YDL232W 111 nt0.72□□□□□ -2.29
TOF1P53840 SNU13YEL026W 381 nt0.72□□□□□ -2.29
TOF1P53840 YLR232WYLR232W 348 nt0.72□□□□□ -2.29
TOF1P53840 YLR294CYLR294C 330 nt0.71□□□□□ -2.3
TOF1P53840 LTE1YAL024C 4308 nt0.71□□□□□ -2.3
TOF1P53840 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
TOF1P53840 YDR544CYDR544C 429 nt0.68□□□□□ -2.3
TOF1P53840 YBL053WYBL053W 375 nt0.68□□□□□ -2.3
TOF1P53840 YOR170WYOR170W 306 nt0.68□□□□□ -2.3
TOF1P53840 YSP1YHR155W 3687 nt0.68□□□□□ -2.3
TOF1P53840 MYO1YHR023W 5787 nt0.67□□□□□ -2.3
TOF1P53840 YHL015W-AYHL015W-A 84 nt0.67□□□□□ -2.3
TOF1P53840 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
TOF1P53840 BEM3YPL115C 3387 nt0.67□□□□□ -2.3
TOF1P53840 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
TOF1P53840 YOR102WYOR102W 351 nt0.66□□□□□ -2.3
TOF1P53840 snR48snR48 113 nt0.66□□□□□ -2.3
TOF1P53840 YJL127W-AYJL127W-A 117 nt0.65□□□□□ -2.31
TOF1P53840 tL(UAA)QtL(UAA)Q 85 nt0.62□□□□□ -2.31
TOF1P53840 COG6YNL041C 2520 nt0.61□□□□□ -2.31
TOF1P53840 YOR329W-AYOR329W-A 210 nt0.61□□□□□ -2.31
TOF1P53840 YBR072C-AYBR072C-A 162 nt0.61□□□□□ -2.31
TOF1P53840 YOR192C-BYOR192C-B 5313 nt0.61□□□□□ -2.31
TOF1P53840 NNF2YGR089W 2811 nt0.6□□□□□ -2.31
TOF1P53840 YOR314W-AYOR314W-A 111 nt0.6□□□□□ -2.31
TOF1P53840 BIR1YJR089W 2865 nt0.59□□□□□ -2.31
TOF1P53840 SDH6YDR379C-A 240 nt0.59□□□□□ -2.31
TOF1P53840 YLL006W-AYLL006W-A 177 nt0.59□□□□□ -2.31
TOF1P53840 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
TOF1P53840 YDL007C-AYDL007C-A 258 nt0.58□□□□□ -2.32
TOF1P53840 ULP2YIL031W 3105 nt0.57□□□□□ -2.32
TOF1P53840 tM(CAU)Q2tM(CAU)Q2 78 nt0.57□□□□□ -2.32
TOF1P53840 snR39BsnR39B 96 nt0.57□□□□□ -2.32
TOF1P53840 PET111YMR257C 2403 nt0.56□□□□□ -2.32
TOF1P53840 GLG1YKR058W 1851 nt0.56□□□□□ -2.32
TOF1P53840 YDR210WYDR210W 228 nt0.55□□□□□ -2.32
TOF1P53840 NIP1YMR309C 2439 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 79.5 ms