Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox1P53783 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox1P53783 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox1P53783 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox1P53783 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.63■□□□□ 0.41
Sox1P53783 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.63■□□□□ 0.41
Sox1P53783 Gm15920-201ENSMUST00000118998 402 ntBASIC17.63■□□□□ 0.41
Sox1P53783 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sox1P53783 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox1P53783 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox1P53783 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox1P53783 Iqck-206ENSMUST00000208658 2891 ntBASIC17.62■□□□□ 0.41
Sox1P53783 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.62■□□□□ 0.41
Sox1P53783 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.62■□□□□ 0.41
Sox1P53783 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.62■□□□□ 0.41
Sox1P53783 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.62■□□□□ 0.41
Sox1P53783 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox1P53783 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox1P53783 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sox1P53783 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox1P53783 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox1P53783 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.61■□□□□ 0.41
Sox1P53783 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.61■□□□□ 0.41
Sox1P53783 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.61■□□□□ 0.41
Sox1P53783 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sox1P53783 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sox1P53783 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.61■□□□□ 0.41
Sox1P53783 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox1P53783 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sox1P53783 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sox1P53783 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sox1P53783 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox1P53783 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Gm27321-201ENSMUST00000185021 205 ntBASIC17.6■□□□□ 0.41
Sox1P53783 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sox1P53783 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox1P53783 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sox1P53783 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.59■□□□□ 0.41
Sox1P53783 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sox1P53783 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sox1P53783 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox1P53783 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox1P53783 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox1P53783 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox1P53783 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox1P53783 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox1P53783 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms