Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YHR125WYHR125W 306 nt-0.89□□□□□ -2.55
VPS55P47111 YJL047C-AYJL047C-A 135 nt-0.9□□□□□ -2.55
VPS55P47111 PAU9YBL108C-A 129 nt-0.9□□□□□ -2.55
VPS55P47111 MPC1YGL080W 393 nt-0.91□□□□□ -2.56
VPS55P47111 YLR285C-AYLR285C-A 171 nt-0.91□□□□□ -2.56
VPS55P47111 snR161snR161 161 nt-0.91□□□□□ -2.56
VPS55P47111 YIL115W-AYIL115W-A 372 nt-0.92□□□□□ -2.56
VPS55P47111 snR36snR36 182 nt-0.94□□□□□ -2.56
VPS55P47111 YDR544CYDR544C 429 nt-0.95□□□□□ -2.56
VPS55P47111 YLL019W-AYLL019W-A 93 nt-0.97□□□□□ -2.56
VPS55P47111 TOM22YNL131W 459 nt-0.97□□□□□ -2.56
VPS55P47111 Q0255Q0255 1419 nt-0.98□□□□□ -2.57
VPS55P47111 APQ12YIL040W 417 nt-0.98□□□□□ -2.57
VPS55P47111 YJL182CYJL182C 318 nt-0.98□□□□□ -2.57
VPS55P47111 YKL100W-AYKL100W-A 90 nt-0.98□□□□□ -2.57
VPS55P47111 RPS27BYHR021C 249 nt-0.99□□□□□ -2.57
VPS55P47111 BI2Q0110 1272 nt-1.01□□□□□ -2.57
VPS55P47111 YMR193C-AYMR193C-A 387 nt-1.01□□□□□ -2.57
VPS55P47111 YCR038W-AYCR038W-A 126 nt-1.02□□□□□ -2.57
VPS55P47111 YGL052WYGL052W 306 nt-1.02□□□□□ -2.57
VPS55P47111 YIL002W-AYIL002W-A 210 nt-1.02□□□□□ -2.57
VPS55P47111 EAF6YJR082C 342 nt-1.02□□□□□ -2.57
VPS55P47111 tP(UGG)QtP(UGG)Q 72 nt-1.03□□□□□ -2.57
VPS55P47111 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
VPS55P47111 YPR016W-AYPR016W-A 261 nt-1.04□□□□□ -2.58
VPS55P47111 HMRA1YCR097W 381 nt-1.05□□□□□ -2.58
VPS55P47111 YJL197C-AYJL197C-A 282 nt-1.05□□□□□ -2.58
VPS55P47111 snR54snR54 86 nt-1.05□□□□□ -2.58
VPS55P47111 STE18YJR086W 333 nt-1.07□□□□□ -2.58
VPS55P47111 YLR434CYLR434C 384 nt-1.07□□□□□ -2.58
VPS55P47111 snR49snR49 165 nt-1.07□□□□□ -2.58
VPS55P47111 YGL182CYGL182C 324 nt-1.08□□□□□ -2.58
VPS55P47111 YPR010C-AYPR010C-A 219 nt-1.08□□□□□ -2.58
VPS55P47111 YML099W-AYML099W-A 330 nt-1.09□□□□□ -2.58
VPS55P47111 YKL123WYKL123W 381 nt-1.1□□□□□ -2.59
VPS55P47111 snR41snR41 95 nt-1.11□□□□□ -2.59
VPS55P47111 JLP2YMR132C 627 nt-1.12□□□□□ -2.59
VPS55P47111 CSE2YNR010W 450 nt-1.12□□□□□ -2.59
VPS55P47111 YNR077CYNR077C 255 nt-1.12□□□□□ -2.59
VPS55P47111 YER006C-AYER006C-A 318 nt-1.14□□□□□ -2.59
VPS55P47111 YER137W-AYER137W-A 306 nt-1.15□□□□□ -2.59
VPS55P47111 YAF9YNL107W 681 nt-1.15□□□□□ -2.59
VPS55P47111 YDR048CYDR048C 315 nt-1.16□□□□□ -2.6
VPS55P47111 YGL149WYGL149W 306 nt-1.17□□□□□ -2.6
VPS55P47111 tW(UCA)QtW(UCA)Q 74 nt-1.17□□□□□ -2.6
VPS55P47111 YNL122CYNL122C 348 nt-1.17□□□□□ -2.6
VPS55P47111 YNL266WYNL266W 420 nt-1.17□□□□□ -2.6
VPS55P47111 YMR001C-AYMR001C-A 231 nt-1.18□□□□□ -2.6
VPS55P47111 YBL039C-AYBL039C-A 84 nt-1.18□□□□□ -2.6
VPS55P47111 YOR314W-AYOR314W-A 111 nt-1.18□□□□□ -2.6
VPS55P47111 snR50snR50 90 nt-1.18□□□□□ -2.6
VPS55P47111 SKI7YOR076C 2244 nt-1.18□□□□□ -2.6
VPS55P47111 tQ(UUG)QtQ(UUG)Q 76 nt-1.19□□□□□ -2.6
VPS55P47111 YLR406C-AYLR406C-A 150 nt-1.19□□□□□ -2.6
VPS55P47111 YOR015WYOR015W 360 nt-1.19□□□□□ -2.6
VPS55P47111 snR60snR60 104 nt-1.21□□□□□ -2.6
VPS55P47111 snR74snR74 88 nt-1.21□□□□□ -2.6
VPS55P47111 snR189snR189 189 nt-1.21□□□□□ -2.6
VPS55P47111 snR69snR69 101 nt-1.22□□□□□ -2.6
VPS55P47111 YJL077W-AYJL077W-A 87 nt-1.22□□□□□ -2.6
VPS55P47111 YDL158CYDL158C 309 nt-1.24□□□□□ -2.61
VPS55P47111 YER090C-AYER090C-A 90 nt-1.24□□□□□ -2.61
VPS55P47111 YOR072W-BYOR072W-B 162 nt-1.24□□□□□ -2.61
VPS55P47111 YOR121CYOR121C 306 nt-1.29□□□□□ -2.62
VPS55P47111 YDR102CYDR102C 333 nt-1.34□□□□□ -2.62
VPS55P47111 YFL019CYFL019C 354 nt-1.34□□□□□ -2.62
VPS55P47111 ATP6Q0085 780 nt-1.35□□□□□ -2.63
VPS55P47111 YIL032CYIL032C 357 nt-1.35□□□□□ -2.63
VPS55P47111 YNL324WYNL324W 396 nt-1.35□□□□□ -2.63
VPS55P47111 YBR285WYBR285W 435 nt-1.35□□□□□ -2.63
VPS55P47111 YLR120W-AYLR120W-A 102 nt-1.36□□□□□ -2.63
VPS55P47111 YNR025CYNR025C 360 nt-1.36□□□□□ -2.63
VPS55P47111 YFL032WYFL032W 321 nt-1.37□□□□□ -2.63
VPS55P47111 RDS3YPR094W 324 nt-1.37□□□□□ -2.63
VPS55P47111 tY(GUA)QtY(GUA)Q 84 nt-1.38□□□□□ -2.63
VPS55P47111 CDC65tQ(CUG)M 72 nt-1.39□□□□□ -2.63
VPS55P47111 ATP19YOL077W-A 207 nt-1.39□□□□□ -2.63
VPS55P47111 snR77snR77 88 nt-1.4□□□□□ -2.63
VPS55P47111 YNL028WYNL028W 318 nt-1.41□□□□□ -2.64
VPS55P47111 YNL205CYNL205C 423 nt-1.41□□□□□ -2.64
VPS55P47111 PMP2YEL017C-A 132 nt-1.42□□□□□ -2.64
VPS55P47111 tR(UCU)Q1tR(UCU)Q1 73 nt-1.42□□□□□ -2.64
VPS55P47111 snR67snR67 82 nt-1.43□□□□□ -2.64
VPS55P47111 HTL1YCR020W-B 237 nt-1.44□□□□□ -2.64
VPS55P47111 YOR008C-AYOR008C-A 225 nt-1.44□□□□□ -2.64
VPS55P47111 YOL013W-BYOL013W-B 291 nt-1.45□□□□□ -2.64
VPS55P47111 YER097WYER097W 330 nt-1.46□□□□□ -2.64
VPS55P47111 YGL041CYGL041C 204 nt-1.47□□□□□ -2.64
VPS55P47111 YEL014CYEL014C 306 nt-1.48□□□□□ -2.65
VPS55P47111 BIL1YOR304C-A 231 nt-1.48□□□□□ -2.65
VPS55P47111 YML054C-AYML054C-A 159 nt-1.49□□□□□ -2.65
VPS55P47111 YMR172C-AYMR172C-A 384 nt-1.49□□□□□ -2.65
VPS55P47111 YKL063CYKL063C 504 nt-1.5□□□□□ -2.65
VPS55P47111 YOR381W-AYOR381W-A 168 nt-1.5□□□□□ -2.65
VPS55P47111 snR39BsnR39B 96 nt-1.5□□□□□ -2.65
VPS55P47111 YLR202CYLR202C 327 nt-1.53□□□□□ -2.65
VPS55P47111 tM(CAU)Q2tM(CAU)Q2 78 nt-1.54□□□□□ -2.66
VPS55P47111 YGR146C-AYGR146C-A 162 nt-1.54□□□□□ -2.66
VPS55P47111 YGR240C-AYGR240C-A 201 nt-1.54□□□□□ -2.66
VPS55P47111 tD(GUC)QtD(GUC)Q 75 nt-1.55□□□□□ -2.66
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms