Protein–RNA interactions for Protein: P40327

RPT2, 26S proteasome regulatory subunit 4 homolog, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT2P40327 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
RPT2P40327 YKL100W-AYKL100W-A 90 nt1.11□□□□□ -2.23
RPT2P40327 YOR161W-AYOR161W-A 81 nt1.11□□□□□ -2.23
RPT2P40327 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
RPT2P40327 YER053C-AYER053C-A 114 nt1.1□□□□□ -2.23
RPT2P40327 COX5BYIL111W 456 nt1.1□□□□□ -2.23
RPT2P40327 YLR282CYLR282C 342 nt1.1□□□□□ -2.23
RPT2P40327 YOR381W-AYOR381W-A 168 nt1.1□□□□□ -2.23
RPT2P40327 SEC8YPR055W 3198 nt1.09□□□□□ -2.24
RPT2P40327 DOP1YDR141C 5097 nt1.09□□□□□ -2.24
RPT2P40327 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
RPT2P40327 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
RPT2P40327 snR190snR190 190 nt1.06□□□□□ -2.24
RPT2P40327 PRP42YDR235W 1635 nt1.06□□□□□ -2.24
RPT2P40327 PRP5YBR237W 2550 nt1.05□□□□□ -2.24
RPT2P40327 YML002WYML002W 2214 nt1.05□□□□□ -2.24
RPT2P40327 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
RPT2P40327 BFR2YDR299W 1605 nt1.04□□□□□ -2.24
RPT2P40327 BEM2YER155C 6504 nt1.04□□□□□ -2.24
RPT2P40327 UTP8YGR128C 2142 nt1.04□□□□□ -2.24
RPT2P40327 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
RPT2P40327 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
RPT2P40327 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
RPT2P40327 YLR041WYLR041W 321 nt1.01□□□□□ -2.25
RPT2P40327 FYV10YIL097W 1551 nt1□□□□□ -2.25
RPT2P40327 HUG1YML058W-A 207 nt0.99□□□□□ -2.25
RPT2P40327 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
RPT2P40327 YDL007C-AYDL007C-A 258 nt0.98□□□□□ -2.25
RPT2P40327 STF2YGR008C 255 nt0.98□□□□□ -2.25
RPT2P40327 YPR160W-AYPR160W-A 81 nt0.98□□□□□ -2.25
RPT2P40327 UBP3YER151C 2739 nt0.97□□□□□ -2.25
RPT2P40327 YGL182CYGL182C 324 nt0.97□□□□□ -2.25
RPT2P40327 LTE1YAL024C 4308 nt0.96□□□□□ -2.26
RPT2P40327 YHL015W-AYHL015W-A 84 nt0.96□□□□□ -2.26
RPT2P40327 YBL053WYBL053W 375 nt0.96□□□□□ -2.26
RPT2P40327 TAH1YCR060W 336 nt0.95□□□□□ -2.26
RPT2P40327 YBL039C-AYBL039C-A 84 nt0.95□□□□□ -2.26
RPT2P40327 YOR102WYOR102W 351 nt0.93□□□□□ -2.26
RPT2P40327 YOR170WYOR170W 306 nt0.93□□□□□ -2.26
RPT2P40327 snR48snR48 113 nt0.93□□□□□ -2.26
RPT2P40327 PAU24YBR301W 363 nt0.93□□□□□ -2.26
RPT2P40327 BEM3YPL115C 3387 nt0.91□□□□□ -2.26
RPT2P40327 tN(GUU)QtN(GUU)Q 71 nt0.91□□□□□ -2.26
RPT2P40327 YLR232WYLR232W 348 nt0.91□□□□□ -2.26
RPT2P40327 YHR131W-AYHR131W-A 246 nt0.9□□□□□ -2.27
RPT2P40327 RKR1YMR247C 4689 nt0.89□□□□□ -2.27
RPT2P40327 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
RPT2P40327 SNU13YEL026W 381 nt0.88□□□□□ -2.27
RPT2P40327 CHS6YJL099W 2241 nt0.88□□□□□ -2.27
RPT2P40327 tL(UAA)QtL(UAA)Q 85 nt0.87□□□□□ -2.27
RPT2P40327 Q0092Q0092 141 nt0.86□□□□□ -2.27
RPT2P40327 YPR159C-AYPR159C-A 102 nt0.86□□□□□ -2.27
RPT2P40327 ATP8Q0080 147 nt0.85□□□□□ -2.27
RPT2P40327 YDR544CYDR544C 429 nt0.85□□□□□ -2.27
RPT2P40327 YGR164WYGR164W 336 nt0.85□□□□□ -2.27
RPT2P40327 YSP1YHR155W 3687 nt0.85□□□□□ -2.27
RPT2P40327 YOR314W-AYOR314W-A 111 nt0.85□□□□□ -2.27
RPT2P40327 OST4YDL232W 111 nt0.84□□□□□ -2.27
RPT2P40327 YOR329W-AYOR329W-A 210 nt0.84□□□□□ -2.27
RPT2P40327 YJL127W-AYJL127W-A 117 nt0.82□□□□□ -2.28
RPT2P40327 YIL142C-AYIL142C-A 333 nt0.81□□□□□ -2.28
RPT2P40327 YNL170WYNL170W 396 nt0.81□□□□□ -2.28
RPT2P40327 SDH6YDR379C-A 240 nt0.8□□□□□ -2.28
RPT2P40327 COG6YNL041C 2520 nt0.79□□□□□ -2.28
RPT2P40327 tM(CAU)Q2tM(CAU)Q2 78 nt0.78□□□□□ -2.28
RPT2P40327 snR39BsnR39B 96 nt0.78□□□□□ -2.28
RPT2P40327 MLP1YKR095W 5628 nt0.77□□□□□ -2.29
RPT2P40327 QCR9YGR183C 201 nt0.77□□□□□ -2.29
RPT2P40327 PET111YMR257C 2403 nt0.76□□□□□ -2.29
RPT2P40327 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
RPT2P40327 YNL067W-BYNL067W-B 141 nt0.75□□□□□ -2.29
RPT2P40327 YBR072C-AYBR072C-A 162 nt0.75□□□□□ -2.29
RPT2P40327 GLG1YKR058W 1851 nt0.72□□□□□ -2.29
RPT2P40327 YDR210WYDR210W 228 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
RPT2P40327 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
RPT2P40327 NNF2YGR089W 2811 nt0.71□□□□□ -2.3
RPT2P40327 RPM2YML091C 3609 nt0.71□□□□□ -2.3
RPT2P40327 ULP2YIL031W 3105 nt0.71□□□□□ -2.3
RPT2P40327 YLL006W-AYLL006W-A 177 nt0.7□□□□□ -2.3
RPT2P40327 YCL001W-BYCL001W-B 255 nt0.68□□□□□ -2.3
RPT2P40327 MYO1YHR023W 5787 nt0.68□□□□□ -2.3
RPT2P40327 YOR192C-BYOR192C-B 5313 nt0.68□□□□□ -2.3
RPT2P40327 tF(GAA)BtF(GAA)B 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)FtF(GAA)F 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)GtF(GAA)G 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)H1tF(GAA)H1 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)H2tF(GAA)H2 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)MtF(GAA)M 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)P1tF(GAA)P1 73 nt0.66□□□□□ -2.3
RPT2P40327 tF(GAA)P2tF(GAA)P2 73 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms