Protein–RNA interactions for Protein: P38351

PAF1, RNA polymerase II-associated protein 1, yeastyeast

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAF1P38351 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
PAF1P38351 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
PAF1P38351 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
PAF1P38351 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
PAF1P38351 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
PAF1P38351 YBR131C-AYBR131C-A 90 nt1.08□□□□□ -2.24
PAF1P38351 YCR038W-AYCR038W-A 126 nt1.07□□□□□ -2.24
PAF1P38351 YLR399W-AYLR399W-A 105 nt1.07□□□□□ -2.24
PAF1P38351 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
PAF1P38351 YIL134C-AYIL134C-A 204 nt1.05□□□□□ -2.24
PAF1P38351 YER053C-AYER053C-A 114 nt1.03□□□□□ -2.24
PAF1P38351 tT(AGU)BtT(AGU)B 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)CtT(AGU)C 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)DtT(AGU)D 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)HtT(AGU)H 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)I1tT(AGU)I1 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)I2tT(AGU)I2 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)JtT(AGU)J 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)N1tT(AGU)N1 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)N2tT(AGU)N2 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)O1tT(AGU)O1 73 nt1.02□□□□□ -2.25
PAF1P38351 tT(AGU)O2tT(AGU)O2 73 nt1.02□□□□□ -2.25
PAF1P38351 YIL002W-AYIL002W-A 210 nt1.02□□□□□ -2.25
PAF1P38351 APQ12YIL040W 417 nt1.02□□□□□ -2.25
PAF1P38351 FYV10YIL097W 1551 nt1.02□□□□□ -2.25
PAF1P38351 CHS6YJL099W 2241 nt1.01□□□□□ -2.25
PAF1P38351 UTP8YGR128C 2142 nt1□□□□□ -2.25
PAF1P38351 SPG3YDR504C 384 nt0.99□□□□□ -2.25
PAF1P38351 SEC1YDR164C 2175 nt0.97□□□□□ -2.25
PAF1P38351 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
PAF1P38351 YEL014CYEL014C 306 nt0.96□□□□□ -2.26
PAF1P38351 PRP5YBR237W 2550 nt0.96□□□□□ -2.26
PAF1P38351 tN(GUU)QtN(GUU)Q 71 nt0.95□□□□□ -2.26
PAF1P38351 YNL097C-BYNL097C-B 123 nt0.95□□□□□ -2.26
PAF1P38351 YLR041WYLR041W 321 nt0.94□□□□□ -2.26
PAF1P38351 HAL9YOL089C 3093 nt0.94□□□□□ -2.26
PAF1P38351 PRP42YDR235W 1635 nt0.93□□□□□ -2.26
PAF1P38351 OST4YDL232W 111 nt0.92□□□□□ -2.26
PAF1P38351 YMR046W-AYMR046W-A 129 nt0.92□□□□□ -2.26
PAF1P38351 JLP2YMR132C 627 nt0.92□□□□□ -2.26
PAF1P38351 YOL014WYOL014W 375 nt0.92□□□□□ -2.26
PAF1P38351 BEM3YPL115C 3387 nt0.92□□□□□ -2.26
PAF1P38351 YDR406W-AYDR406W-A 246 nt0.91□□□□□ -2.26
PAF1P38351 YJL127W-AYJL127W-A 117 nt0.9□□□□□ -2.27
PAF1P38351 TRS65YGR166W 1683 nt0.9□□□□□ -2.27
PAF1P38351 YHR131W-AYHR131W-A 246 nt0.89□□□□□ -2.27
PAF1P38351 YKL145W-AYKL145W-A 93 nt0.89□□□□□ -2.27
PAF1P38351 tM(CAU)Q1tM(CAU)Q1 76 nt0.87□□□□□ -2.27
PAF1P38351 SNU13YEL026W 381 nt0.86□□□□□ -2.27
PAF1P38351 YJL182CYJL182C 318 nt0.86□□□□□ -2.27
PAF1P38351 YSP1YHR155W 3687 nt0.85□□□□□ -2.27
PAF1P38351 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
PAF1P38351 snR52snR52 92 nt0.85□□□□□ -2.27
PAF1P38351 YLR232WYLR232W 348 nt0.84□□□□□ -2.27
PAF1P38351 PET111YMR257C 2403 nt0.81□□□□□ -2.28
PAF1P38351 TAH1YCR060W 336 nt0.81□□□□□ -2.28
PAF1P38351 PRP39YML046W 1890 nt0.81□□□□□ -2.28
PAF1P38351 ULP2YIL031W 3105 nt0.81□□□□□ -2.28
PAF1P38351 LTE1YAL024C 4308 nt0.8□□□□□ -2.28
PAF1P38351 YLR342W-AYLR342W-A 174 nt0.8□□□□□ -2.28
PAF1P38351 snR46snR46 197 nt0.8□□□□□ -2.28
PAF1P38351 NNF2YGR089W 2811 nt0.79□□□□□ -2.28
PAF1P38351 YEL073CYEL073C 324 nt0.78□□□□□ -2.28
PAF1P38351 YMR272W-AYMR272W-A 114 nt0.78□□□□□ -2.28
PAF1P38351 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.28
PAF1P38351 UTP10YJL109C 5310 nt0.76□□□□□ -2.29
PAF1P38351 FMP27YLR454W 7887 nt0.76□□□□□ -2.29
PAF1P38351 YBL039C-AYBL039C-A 84 nt0.75□□□□□ -2.29
PAF1P38351 YGL182CYGL182C 324 nt0.74□□□□□ -2.29
PAF1P38351 YLL006W-AYLL006W-A 177 nt0.74□□□□□ -2.29
PAF1P38351 YDR544CYDR544C 429 nt0.73□□□□□ -2.29
PAF1P38351 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
PAF1P38351 AI1Q0050 2505 nt0.7□□□□□ -2.3
PAF1P38351 YOR381W-AYOR381W-A 168 nt0.68□□□□□ -2.3
PAF1P38351 SBH1YER087C-B 249 nt0.66□□□□□ -2.3
PAF1P38351 MLP1YKR095W 5628 nt0.66□□□□□ -2.3
PAF1P38351 YDR371C-AYDR371C-A 105 nt0.65□□□□□ -2.31
PAF1P38351 BIR1YJR089W 2865 nt0.64□□□□□ -2.31
PAF1P38351 NIP1YMR309C 2439 nt0.64□□□□□ -2.31
PAF1P38351 RPS26AYGL189C 360 nt0.64□□□□□ -2.31
PAF1P38351 YJL150WYJL150W 303 nt0.64□□□□□ -2.31
PAF1P38351 GLG1YKR058W 1851 nt0.63□□□□□ -2.31
PAF1P38351 SDH6YDR379C-A 240 nt0.63□□□□□ -2.31
PAF1P38351 COG6YNL041C 2520 nt0.62□□□□□ -2.31
PAF1P38351 YOR170WYOR170W 306 nt0.61□□□□□ -2.31
PAF1P38351 CSE1YGL238W 2883 nt0.59□□□□□ -2.31
PAF1P38351 IQG1YPL242C 4488 nt0.59□□□□□ -2.32
PAF1P38351 ORC3YLL004W 1851 nt0.58□□□□□ -2.32
PAF1P38351 YOR314W-AYOR314W-A 111 nt0.57□□□□□ -2.32
PAF1P38351 YNL337WYNL337W 255 nt0.55□□□□□ -2.32
PAF1P38351 tM(CAU)Q2tM(CAU)Q2 78 nt0.54□□□□□ -2.32
PAF1P38351 BUL2YML111W 2763 nt0.52□□□□□ -2.33
PAF1P38351 YHL015W-AYHL015W-A 84 nt0.52□□□□□ -2.33
PAF1P38351 MYO1YHR023W 5787 nt0.5□□□□□ -2.33
PAF1P38351 YLR466C-BYLR466C-B 117 nt0.5□□□□□ -2.33
PAF1P38351 YDR210WYDR210W 228 nt0.49□□□□□ -2.33
PAF1P38351 snR48snR48 113 nt0.49□□□□□ -2.33
PAF1P38351 YGR151CYGR151C 336 nt0.48□□□□□ -2.33
PAF1P38351 YNL198CYNL198C 303 nt0.48□□□□□ -2.33
PAF1P38351 YOR329W-AYOR329W-A 210 nt0.48□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms