Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.91■□□□□ 0.46
PrnpP04925 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PrnpP04925 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PrnpP04925 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PrnpP04925 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrnpP04925 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PrnpP04925 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PrnpP04925 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PrnpP04925 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.89■□□□□ 0.45
PrnpP04925 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.89■□□□□ 0.45
PrnpP04925 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PrnpP04925 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PrnpP04925 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrnpP04925 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PrnpP04925 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PrnpP04925 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PrnpP04925 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.88■□□□□ 0.45
PrnpP04925 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.88■□□□□ 0.45
PrnpP04925 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PrnpP04925 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PrnpP04925 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PrnpP04925 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PrnpP04925 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrnpP04925 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
PrnpP04925 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.87■□□□□ 0.45
PrnpP04925 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.87■□□□□ 0.45
PrnpP04925 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.87■□□□□ 0.45
PrnpP04925 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PrnpP04925 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrnpP04925 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrnpP04925 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrnpP04925 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms