Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm11127A7VMS2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm11127A7VMS2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Gm18284-201ENSMUST00000172604 624 ntBASIC15.27■□□□□ 0.04
Gm11127A7VMS2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Gm26571-201ENSMUST00000181399 666 ntBASIC15.27■□□□□ 0.04
Gm11127A7VMS2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm11127A7VMS2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm11127A7VMS2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Gm42569-201ENSMUST00000200539 472 ntBASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Gm11127A7VMS2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm11127A7VMS2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms