Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Gm7860-201ENSMUST00000121190 879 ntBASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Golgb1-201ENSMUST00000023534 498 ntBASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8-1A0A075B641 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav8-1A0A075B641 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8-1A0A075B641 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Rps24-207ENSMUST00000224568 714 ntBASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8-1A0A075B641 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms