Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 RN7SL126P-201ENST00000616400 299 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
FREM3P0C091 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 HCG18-244ENST00000602516 2890 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 VN1R66P-201ENST00000412929 916 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 AC244452.1-201ENST00000413798 141 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 VDAC1P2-201ENST00000423609 850 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
FREM3P0C091 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 AC091982.1-202ENST00000473923 343 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 DCAF13P2-201ENST00000514188 555 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
FREM3P0C091 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 AL121949.2-201ENST00000403446 1548 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AL035563.1-201ENST00000609087 1539 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 AC015871.3-201ENST00000618835 2261 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 RNA5SP85-201ENST00000365378 119 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 VDAC1P10-201ENST00000416715 891 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 CYP4F34P-201ENST00000425951 481 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.43□□□□□ -1.38
FREM3P0C091 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 RN7SL325P-201ENST00000460434 283 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 RN7SL70P-201ENST00000478322 302 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 RPL23AP80-201ENST00000495605 424 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
FREM3P0C091 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.43□□□□□ -1.38
FREM3P0C091 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.43□□□□□ -1.38
FREM3P0C091 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 AC090774.4-201ENST00000578888 1372 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AC061975.5-201ENST00000584928 1441 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
FREM3P0C091 MIR6774-201ENST00000614651 70 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 HTR1DP1-201ENST00000616500 888 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 AC012629.3-201ENST00000623397 328 ntBASIC6.43□□□□□ -1.38
FREM3P0C091 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
FREM3P0C091 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.42□□□□□ -1.38
FREM3P0C091 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
FREM3P0C091 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.42□□□□□ -1.38
FREM3P0C091 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
FREM3P0C091 CDY7P-201ENST00000429883 1604 ntBASIC6.42□□□□□ -1.38
FREM3P0C091 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.42□□□□□ -1.38
FREM3P0C091 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
FREM3P0C091 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FREM3P0C091 RPL24P7-201ENST00000399435 453 ntBASIC6.42□□□□□ -1.38
FREM3P0C091 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.42□□□□□ -1.38
FREM3P0C091 FTLP17-201ENST00000432567 525 ntBASIC6.42□□□□□ -1.38
FREM3P0C091 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms