Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 CYP2G2P-201ENST00000594920 1485 ntBASIC6.61□□□□□ -1.35
SSX4O60224 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 AL450124.1-201ENST00000376401 353 ntBASIC6.61□□□□□ -1.35
SSX4O60224 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 MIR1204-201ENST00000408388 67 ntBASIC6.61□□□□□ -1.35
SSX4O60224 SNX18P13-201ENST00000412442 529 ntBASIC6.61□□□□□ -1.35
SSX4O60224 AC003071.2-201ENST00000423857 315 ntBASIC6.61□□□□□ -1.35
SSX4O60224 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 RN7SL549P-201ENST00000478997 282 ntBASIC6.61□□□□□ -1.35
SSX4O60224 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX4O60224 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX4O60224 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 AC096754.1-201ENST00000508904 818 ntBASIC6.61□□□□□ -1.35
SSX4O60224 MTCO3P42-201ENST00000509488 518 ntBASIC6.61□□□□□ -1.35
SSX4O60224 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 MTCO3P39-201ENST00000514812 518 ntBASIC6.61□□□□□ -1.35
SSX4O60224 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX4O60224 AL049869.4-201ENST00000555669 178 ntBASIC6.61□□□□□ -1.35
SSX4O60224 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX4O60224 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX4O60224 DNM1P33-201ENST00000565222 270 ntBASIC6.61□□□□□ -1.35
SSX4O60224 RN7SL689P-201ENST00000577215 297 ntBASIC6.61□□□□□ -1.35
SSX4O60224 FXYD6P1-201ENST00000604857 285 ntBASIC6.61□□□□□ -1.35
SSX4O60224 AC023206.1-201ENST00000605824 298 ntBASIC6.61□□□□□ -1.35
SSX4O60224 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.61□□□□□ -1.35
SSX4O60224 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 AC087269.2-201ENST00000641764 975 ntBASIC6.61□□□□□ -1.35
SSX4O60224 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SSX4O60224 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SSX4O60224 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX4O60224 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 CDYLP1-201ENST00000419017 1458 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AC090132.1-201ENST00000524071 1480 ntBASIC6.6□□□□□ -1.35
SSX4O60224 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSX4O60224 MARK2P4-201ENST00000503381 2380 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.6□□□□□ -1.35
SSX4O60224 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX4O60224 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 FO393419.1-201ENST00000443746 355 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 AC234771.3-201ENST00000454984 622 ntBASIC6.6□□□□□ -1.35
SSX4O60224 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 AC013787.1-201ENST00000460165 307 ntBASIC6.6□□□□□ -1.35
SSX4O60224 RN7SL19P-201ENST00000462522 306 ntBASIC6.6□□□□□ -1.35
SSX4O60224 RN7SL145P-201ENST00000469955 296 ntBASIC6.6□□□□□ -1.35
SSX4O60224 RPL5P15-201ENST00000475870 897 ntBASIC6.6□□□□□ -1.35
SSX4O60224 RN7SL335P-201ENST00000482790 304 ntBASIC6.6□□□□□ -1.35
SSX4O60224 NDUFS5P2-201ENST00000484004 306 ntBASIC6.6□□□□□ -1.35
SSX4O60224 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 AC253576.1-201ENST00000511645 1156 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms