Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 AL162632.2-201ENST00000553933 399 ntBASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 AL049541.2-201ENST00000626377 555 ntBASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 AL365217.1-201ENST00000398578 2436 ntBASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 AL358913.2-201ENST00000553881 1548 ntBASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 AC011008.2-201ENST00000624866 3352 ntBASIC10.88□□□□□ -0.67
RIMBP3Q9UFD9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 MEF2AP1-201ENST00000454867 863 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 RN7SL706P-201ENST00000460079 292 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC112191.2-201ENST00000522428 333 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 VN2R1P-201ENST00000449668 1743 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 TPTE2P2-201ENST00000403471 1466 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 TMC3-AS1-206ENST00000612811 2726 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 RNU1-19P-201ENST00000363306 165 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 CAPNS1P1-201ENST00000401029 633 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 GAPDHP57-201ENST00000424400 585 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 LSM3P3-201ENST00000436601 306 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC027801.3-201ENST00000515049 698 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AP005136.2-201ENST00000583253 1049 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC007255.2-201ENST00000604053 631 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 FAM27E2-201ENST00000619668 403 ntBASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RIMBP3Q9UFD9 AC016722.3-201ENST00000568862 2463 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 PSMC1P6-201ENST00000477233 1319 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 RPL12P38-202ENST00000588627 2319 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 RN7SKP103-201ENST00000363848 320 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 RNA5SP474-201ENST00000391234 90 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 RPL21P50-201ENST00000417698 477 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 RPS27P18-201ENST00000431701 247 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 OTX2P1-201ENST00000450956 354 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AL035410.2-201ENST00000604963 864 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms