Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL139274.1-201ENST00000402374 936 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RAB9AP4-201ENST00000415230 609 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 OR7E36P-201ENST00000419933 954 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL606495.1-201ENST00000422100 813 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 Z98752.2-201ENST00000432727 312 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 ARL2BPP7-201ENST00000446421 490 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL451081.2-201ENST00000448115 933 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 MORF4L1P4-201ENST00000450245 976 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 YAP1P2-201ENST00000455104 610 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 HMGB1P38-201ENST00000490557 577 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RPL5P11-201ENST00000498068 893 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC105391.1-201ENST00000503155 1045 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 OR7E129P-201ENST00000504655 968 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 MTND5P13-201ENST00000513046 1079 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 MRPS33P3-201ENST00000513456 322 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 MTCO2P32-201ENST00000514865 403 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 UBTFL9-201ENST00000534504 1148 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC093014.1-201ENST00000548926 724 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC005479.3-201ENST00000602790 431 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC018737.1-201ENST00000603900 204 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC024941.1-201ENST00000612250 334 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 MIR6762-201ENST00000613340 86 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 uc_338.33-201ENST00000614988 170 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC073530.2-201ENST00000623987 261 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AL136967.1-201ENST00000625120 441 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 AC073488.5-201ENST00000631993 754 ntBASIC7.31□□□□□ -1.24
ATG4DQ86TL0 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 CD200-203ENST00000473539 1524 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.31□□□□□ -1.24
ATG4DQ86TL0 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 OR8G3P-203ENST00000641848 1344 ntBASIC7.3□□□□□ -1.24
ATG4DQ86TL0 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 AC022150.4-201ENST00000598322 2848 ntBASIC7.3□□□□□ -1.24
ATG4DQ86TL0 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ATG4DQ86TL0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms