Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC026458.1-201ENST00000564330 438 ntBASIC10□□□□□ -0.81
CPS1P31327 AC096708.2-201ENST00000577676 512 ntBASIC10□□□□□ -0.81
CPS1P31327 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC10□□□□□ -0.81
CPS1P31327 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC10□□□□□ -0.81
CPS1P31327 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
CPS1P31327 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC10□□□□□ -0.81
CPS1P31327 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC9.99□□□□□ -0.81
CPS1P31327 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CPS1P31327 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC9.99□□□□□ -0.81
CPS1P31327 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 LCN1P2-201ENST00000372030 223 ntBASIC9.99□□□□□ -0.81
CPS1P31327 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 ATP6V1G1P4-201ENST00000438388 335 ntBASIC9.99□□□□□ -0.81
CPS1P31327 SNORA81.1-201ENST00000458922 177 ntBASIC9.99□□□□□ -0.81
CPS1P31327 AC124945.1-201ENST00000485133 188 ntBASIC9.99□□□□□ -0.81
CPS1P31327 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC9.99□□□□□ -0.81
CPS1P31327 MIR3614-201ENST00000581261 86 ntBASIC9.99□□□□□ -0.81
CPS1P31327 AC098590.2-201ENST00000614787 281 ntBASIC9.99□□□□□ -0.81
CPS1P31327 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CPS1P31327 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC9.99□□□□□ -0.81
CPS1P31327 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
CPS1P31327 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC9.99□□□□□ -0.81
CPS1P31327 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC9.99□□□□□ -0.81
CPS1P31327 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CPS1P31327 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CPS1P31327 RN7SKP69-201ENST00000365390 305 ntBASIC9.98□□□□□ -0.81
CPS1P31327 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 FABP5P1-201ENST00000423401 411 ntBASIC9.98□□□□□ -0.81
CPS1P31327 AC104843.2-201ENST00000427666 297 ntBASIC9.98□□□□□ -0.81
CPS1P31327 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC9.98□□□□□ -0.81
CPS1P31327 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC9.98□□□□□ -0.81
CPS1P31327 SETP17-201ENST00000534163 817 ntBASIC9.98□□□□□ -0.81
CPS1P31327 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC9.98□□□□□ -0.81
CPS1P31327 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC9.98□□□□□ -0.81
CPS1P31327 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC9.98□□□□□ -0.81
CPS1P31327 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC9.98□□□□□ -0.81
CPS1P31327 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 PAH-201ENST00000307000 2466 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CPS1P31327 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 LRRC37A15P-201ENST00000514785 1355 ntBASIC9.98□□□□□ -0.81
CPS1P31327 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC9.98□□□□□ -0.81
CPS1P31327 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.98□□□□□ -0.81
CPS1P31327 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CPS1P31327 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC9.97□□□□□ -0.81
CPS1P31327 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
CPS1P31327 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
CPS1P31327 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 PSMA6P1-201ENST00000400275 741 ntBASIC9.97□□□□□ -0.81
CPS1P31327 MIR937-201ENST00000401271 86 ntBASIC9.97□□□□□ -0.81
CPS1P31327 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC9.97□□□□□ -0.81
CPS1P31327 RPS26P11-201ENST00000463445 348 ntBASIC9.97□□□□□ -0.81
CPS1P31327 RPS26P6-201ENST00000475156 348 ntBASIC9.97□□□□□ -0.81
CPS1P31327 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC9.97□□□□□ -0.81
CPS1P31327 AL138895.2-201ENST00000603019 178 ntBASIC9.97□□□□□ -0.81
CPS1P31327 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC9.97□□□□□ -0.81
CPS1P31327 RAB28P4-201ENST00000622233 665 ntBASIC9.97□□□□□ -0.81
CPS1P31327 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
CPS1P31327 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CPS1P31327 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.97□□□□□ -0.81
CPS1P31327 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC9.97□□□□□ -0.81
CPS1P31327 AL096816.1-201ENST00000623300 2920 ntBASIC9.97□□□□□ -0.81
CPS1P31327 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC9.97□□□□□ -0.81
CPS1P31327 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.97□□□□□ -0.81
CPS1P31327 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms