Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC008967.1-201ENST00000504843 163 ntBASIC5.04□□□□□ -1.6
RPL39P62891 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.04□□□□□ -1.6
RPL39P62891 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 OR7E96P-201ENST00000530816 976 ntBASIC5.04□□□□□ -1.6
RPL39P62891 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC5.04□□□□□ -1.6
RPL39P62891 AC244034.2-201ENST00000562504 509 ntBASIC5.04□□□□□ -1.6
RPL39P62891 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC5.04□□□□□ -1.6
RPL39P62891 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 LINC00674-202ENST00000590734 160 ntBASIC5.04□□□□□ -1.6
RPL39P62891 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 AF146191.1-201ENST00000604941 889 ntBASIC5.04□□□□□ -1.6
RPL39P62891 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 AL451054.3-201ENST00000611115 776 ntBASIC5.04□□□□□ -1.6
RPL39P62891 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.04□□□□□ -1.6
RPL39P62891 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RPL39P62891 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.04□□□□□ -1.6
RPL39P62891 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 AC122713.2-201ENST00000624942 3335 ntBASIC5.04□□□□□ -1.6
RPL39P62891 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RPL39P62891 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 UGT2B27P-201ENST00000505092 1620 ntBASIC5.04□□□□□ -1.6
RPL39P62891 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC5.04□□□□□ -1.6
RPL39P62891 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.04□□□□□ -1.6
RPL39P62891 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.04□□□□□ -1.6
RPL39P62891 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPL39P62891 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 HSPD1P4-201ENST00000547203 1702 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AL157713.1-201ENST00000379752 1531 ntBASIC5.03□□□□□ -1.6
RPL39P62891 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 AL035563.1-201ENST00000609087 1539 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC087045.3-201ENST00000623046 2468 ntBASIC5.03□□□□□ -1.6
RPL39P62891 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 RNU4-59P-201ENST00000364447 116 ntBASIC5.03□□□□□ -1.6
RPL39P62891 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 GZMB-203ENST00000382542 666 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 AC006511.2-201ENST00000388966 660 ntBASIC5.03□□□□□ -1.6
RPL39P62891 RNU6-1055P-201ENST00000391085 107 ntBASIC5.03□□□□□ -1.6
RPL39P62891 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 CYP4F62P-201ENST00000417310 524 ntBASIC5.03□□□□□ -1.6
RPL39P62891 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC5.03□□□□□ -1.6
RPL39P62891 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC5.03□□□□□ -1.6
RPL39P62891 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 DDX11L10-201ENST00000430178 571 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC244505.2-201ENST00000435089 759 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AL731892.1-201ENST00000437364 1192 ntBASIC5.03□□□□□ -1.6
RPL39P62891 FUNDC2P2-202ENST00000443452 493 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC5.03□□□□□ -1.6
RPL39P62891 PRDX1P1-201ENST00000449329 596 ntBASIC5.03□□□□□ -1.6
RPL39P62891 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 AC012493.1-201ENST00000453252 760 ntBASIC5.03□□□□□ -1.6
RPL39P62891 MRPS21P1-201ENST00000453850 223 ntBASIC5.03□□□□□ -1.6
RPL39P62891 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 RN7SL798P-201ENST00000468562 301 ntBASIC5.03□□□□□ -1.6
RPL39P62891 RN7SL259P-201ENST00000478499 253 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC120057.1-201ENST00000483947 663 ntBASIC5.03□□□□□ -1.6
RPL39P62891 OR10J9P-201ENST00000511932 987 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC093281.1-201ENST00000514239 549 ntBASIC5.03□□□□□ -1.6
RPL39P62891 IGHVII-22-1-201ENST00000517888 265 ntBASIC5.03□□□□□ -1.6
RPL39P62891 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 AC009997.1-201ENST00000557862 129 ntBASIC5.03□□□□□ -1.6
RPL39P62891 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 AC023827.2-201ENST00000566880 1061 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC008870.2-201ENST00000568262 1024 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 MIR5095-201ENST00000578844 88 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms