Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS33AQ96AX1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS33AQ96AX1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS33AQ96AX1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS33AQ96AX1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 AC004854.2-201ENST00000608450 1441 ntBASIC19.19■□□□□ 0.66
VPS33AQ96AX1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 AIRN-201ENST00000601203 4374 ntBASIC19.19■□□□□ 0.66
VPS33AQ96AX1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 TERF1P2-201ENST00000583350 1212 ntBASIC19.19■□□□□ 0.66
VPS33AQ96AX1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS33AQ96AX1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 FAM21FP-204ENST00000608637 956 ntBASIC19.18■□□□□ 0.66
VPS33AQ96AX1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 AP000974.1-201ENST00000623909 2387 ntBASIC19.18■□□□□ 0.66
VPS33AQ96AX1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS33AQ96AX1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 AC019069.1-201ENST00000610008 1333 ntBASIC19.17■□□□□ 0.66
VPS33AQ96AX1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS33AQ96AX1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.16■□□□□ 0.66
VPS33AQ96AX1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 AC123595.1-201ENST00000440769 1046 ntBASIC19.16■□□□□ 0.66
VPS33AQ96AX1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms