Protein–RNA interactions for Protein: Q04053

SNX41, Sorting nexin-41, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX41Q04053 NPR2YEL062W 1848 nt0.61□□□□□ -2.31
SNX41Q04053 CHS6YJL099W 2241 nt0.6□□□□□ -2.31
SNX41Q04053 YPL225WYPL225W 441 nt0.6□□□□□ -2.31
SNX41Q04053 ASE1YOR058C 2658 nt0.59□□□□□ -2.31
SNX41Q04053 RPL26BYGR034W 384 nt0.59□□□□□ -2.31
SNX41Q04053 YHR007C-AYHR007C-A 216 nt0.59□□□□□ -2.31
SNX41Q04053 YNL211CYNL211C 261 nt0.59□□□□□ -2.31
SNX41Q04053 YFR012W-AYFR012W-A 87 nt0.58□□□□□ -2.32
SNX41Q04053 TAR1YLR154W-C 375 nt0.58□□□□□ -2.32
SNX41Q04053 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
SNX41Q04053 YDR118W-AYDR118W-A 117 nt0.57□□□□□ -2.32
SNX41Q04053 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
SNX41Q04053 SSS1YDR086C 243 nt0.56□□□□□ -2.32
SNX41Q04053 YFL019CYFL019C 354 nt0.56□□□□□ -2.32
SNX41Q04053 SGF11YPL047W 300 nt0.56□□□□□ -2.32
SNX41Q04053 YMR160WYMR160W 2451 nt0.56□□□□□ -2.32
SNX41Q04053 YML002WYML002W 2214 nt0.56□□□□□ -2.32
SNX41Q04053 YDR048CYDR048C 315 nt0.55□□□□□ -2.32
SNX41Q04053 YMR321CYMR321C 318 nt0.55□□□□□ -2.32
SNX41Q04053 YOR218CYOR218C 420 nt0.55□□□□□ -2.32
SNX41Q04053 YHL046W-AYHL046W-A 327 nt0.53□□□□□ -2.32
SNX41Q04053 YPR016W-AYPR016W-A 261 nt0.53□□□□□ -2.32
SNX41Q04053 LTE1YAL024C 4308 nt0.53□□□□□ -2.32
SNX41Q04053 tF(GAA)BtF(GAA)B 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)FtF(GAA)F 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)GtF(GAA)G 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)H1tF(GAA)H1 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)H2tF(GAA)H2 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)MtF(GAA)M 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)P1tF(GAA)P1 73 nt0.52□□□□□ -2.33
SNX41Q04053 tF(GAA)P2tF(GAA)P2 73 nt0.52□□□□□ -2.33
SNX41Q04053 FYV10YIL097W 1551 nt0.52□□□□□ -2.33
SNX41Q04053 SEC8YPR055W 3198 nt0.52□□□□□ -2.33
SNX41Q04053 YIL115W-AYIL115W-A 372 nt0.51□□□□□ -2.33
SNX41Q04053 YPR160W-AYPR160W-A 81 nt0.51□□□□□ -2.33
SNX41Q04053 STE5YDR103W 2754 nt0.5□□□□□ -2.33
SNX41Q04053 COG8YML071C 1824 nt0.5□□□□□ -2.33
SNX41Q04053 YIL134C-AYIL134C-A 204 nt0.49□□□□□ -2.33
SNX41Q04053 YPR170W-AYPR170W-A 186 nt0.49□□□□□ -2.33
SNX41Q04053 YDL185C-AYDL185C-A 228 nt0.48□□□□□ -2.33
SNX41Q04053 YLR399W-AYLR399W-A 105 nt0.48□□□□□ -2.33
SNX41Q04053 YPR012WYPR012W 255 nt0.48□□□□□ -2.33
SNX41Q04053 HAL9YOL089C 3093 nt0.47□□□□□ -2.33
SNX41Q04053 PRP5YBR237W 2550 nt0.47□□□□□ -2.33
SNX41Q04053 BIR1YJR089W 2865 nt0.47□□□□□ -2.33
SNX41Q04053 RPS27BYHR021C 249 nt0.47□□□□□ -2.33
SNX41Q04053 YJL127W-AYJL127W-A 117 nt0.47□□□□□ -2.33
SNX41Q04053 YKL145W-AYKL145W-A 93 nt0.47□□□□□ -2.33
SNX41Q04053 COX5BYIL111W 456 nt0.46□□□□□ -2.34
SNX41Q04053 YAL067W-AYAL067W-A 228 nt0.46□□□□□ -2.34
SNX41Q04053 YSP1YHR155W 3687 nt0.45□□□□□ -2.34
SNX41Q04053 BEM3YPL115C 3387 nt0.45□□□□□ -2.34
SNX41Q04053 YCR018C-AYCR018C-A 255 nt0.45□□□□□ -2.34
SNX41Q04053 QCR9YGR183C 201 nt0.45□□□□□ -2.34
SNX41Q04053 snR190snR190 190 nt0.45□□□□□ -2.34
SNX41Q04053 OST4YDL232W 111 nt0.44□□□□□ -2.34
SNX41Q04053 YDR102CYDR102C 333 nt0.44□□□□□ -2.34
SNX41Q04053 YMR307C-AYMR307C-A 195 nt0.44□□□□□ -2.34
SNX41Q04053 YAF9YNL107W 681 nt0.44□□□□□ -2.34
SNX41Q04053 YDR354C-AYDR354C-A 144 nt0.43□□□□□ -2.34
SNX41Q04053 CSE2YNR010W 450 nt0.43□□□□□ -2.34
SNX41Q04053 VIK1YPL253C 1944 nt0.42□□□□□ -2.34
SNX41Q04053 PET111YMR257C 2403 nt0.42□□□□□ -2.34
SNX41Q04053 HTL1YCR020W-B 237 nt0.42□□□□□ -2.34
SNX41Q04053 PRP42YDR235W 1635 nt0.42□□□□□ -2.34
SNX41Q04053 snR60snR60 104 nt0.41□□□□□ -2.34
SNX41Q04053 YJL026C-AYJL026C-A 222 nt0.41□□□□□ -2.34
SNX41Q04053 YPR197CYPR197C 564 nt0.41□□□□□ -2.34
SNX41Q04053 ULP2YIL031W 3105 nt0.41□□□□□ -2.34
SNX41Q04053 PAU12YGR294W 363 nt0.4□□□□□ -2.35
SNX41Q04053 YPL038W-AYPL038W-A 192 nt0.4□□□□□ -2.35
SNX41Q04053 SBH1YER087C-B 249 nt0.39□□□□□ -2.35
SNX41Q04053 YOL014WYOL014W 375 nt0.39□□□□□ -2.35
SNX41Q04053 YIL032CYIL032C 357 nt0.38□□□□□ -2.35
SNX41Q04053 MLP1YKR095W 5628 nt0.38□□□□□ -2.35
SNX41Q04053 YDR183C-AYDR183C-A 258 nt0.37□□□□□ -2.35
SNX41Q04053 YKL136WYKL136W 399 nt0.37□□□□□ -2.35
SNX41Q04053 YLR282CYLR282C 342 nt0.37□□□□□ -2.35
SNX41Q04053 YOR345CYOR345C 351 nt0.37□□□□□ -2.35
SNX41Q04053 THO2YNL139C 4794 nt0.37□□□□□ -2.35
SNX41Q04053 YEL020C-BYEL020C-B 198 nt0.35□□□□□ -2.35
SNX41Q04053 tN(GUU)QtN(GUU)Q 71 nt0.35□□□□□ -2.35
SNX41Q04053 YOR192C-BYOR192C-B 5313 nt0.35□□□□□ -2.35
SNX41Q04053 COY1YKL179C 2040 nt0.34□□□□□ -2.36
SNX41Q04053 ABF2YMR072W 552 nt0.34□□□□□ -2.36
SNX41Q04053 snR36snR36 182 nt0.34□□□□□ -2.36
SNX41Q04053 AI1Q0050 2505 nt0.34□□□□□ -2.36
SNX41Q04053 TRS65YGR166W 1683 nt0.33□□□□□ -2.36
SNX41Q04053 YCR022CYCR022C 345 nt0.33□□□□□ -2.36
SNX41Q04053 ULI1YFR026C 510 nt0.33□□□□□ -2.36
SNX41Q04053 YGL149WYGL149W 306 nt0.33□□□□□ -2.36
SNX41Q04053 YJL197C-AYJL197C-A 282 nt0.33□□□□□ -2.36
SNX41Q04053 YDL240C-AYDL240C-A 138 nt0.32□□□□□ -2.36
SNX41Q04053 YMR193C-AYMR193C-A 387 nt0.32□□□□□ -2.36
SNX41Q04053 YPR092WYPR092W 306 nt0.32□□□□□ -2.36
SNX41Q04053 IQG1YPL242C 4488 nt0.32□□□□□ -2.36
SNX41Q04053 ATP6Q0085 780 nt0.31□□□□□ -2.36
SNX41Q04053 YFL063WYFL063W 456 nt0.31□□□□□ -2.36
SNX41Q04053 YNL028WYNL028W 318 nt0.3□□□□□ -2.36
SNX41Q04053 NNF2YGR089W 2811 nt0.29□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms