Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm42642-201ENSMUST00000200683 355 ntBASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Gm10033-202ENSMUST00000211874 928 ntBASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-4A0A0G2JFX3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms