Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 RNU1-38P-201ENST00000362817 144 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 RN7SKP63-201ENST00000363187 301 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 RNA5SP218-201ENST00000363188 109 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 ARMCX7P-201ENST00000372828 562 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL355375.1-201ENST00000405686 392 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 RN7SKP131-201ENST00000410698 301 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL355862.1-201ENST00000412705 353 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL022100.1-202ENST00000421214 548 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AF274573.1-201ENST00000430535 494 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL354983.1-201ENST00000434580 906 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 NIFKP4-201ENST00000567275 1192 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AL390882.1-201ENST00000618821 594 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC073488.7-201ENST00000633785 778 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 AP002364.1-201ENST00000623330 3386 ntBASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
NPIPA3F8WFD2 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL078621.1-201ENST00000272567 768 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL139135.1-201ENST00000412675 209 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL161742.1-201ENST00000418154 584 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 FTOP1-201ENST00000419363 861 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 SNORA35.1-201ENST00000458908 128 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RPS4XP19-201ENST00000460237 736 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL928654.1-201ENST00000476081 354 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RPS10P28-201ENST00000480396 498 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 EGLN3P1-201ENST00000541727 720 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC073488.8-201ENST00000631952 757 ntBASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms