Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RN7SL740P-201ENST00000467060 344 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 SNRPD2P1-201ENST00000489253 354 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AC116353.1-201ENST00000489727 316 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 NTAN1P2-201ENST00000515730 940 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 RN7SKP14-201ENST00000516000 329 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC020549.1-201ENST00000536916 1440 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC007114.2-201ENST00000576014 4281 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AC010327.2-201ENST00000587647 488 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 LINC00674-202ENST00000590734 160 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AC010719.1-201ENST00000602992 747 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 AL590560.2-201ENST00000608430 732 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 RN7SL82P-201ENST00000611435 237 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AL031651.1-201ENST00000615357 1438 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 RN7SL628P-201ENST00000619139 237 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 MIR6723-201ENST00000621981 89 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC116631.1-202ENST00000640984 683 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 NF1P8-201ENST00000415351 1461 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX3Q99909 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX3Q99909 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
SSX3Q99909 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSX3Q99909 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 CCDC150P1-201ENST00000537123 2215 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 RNVU1-15-201ENST00000384476 165 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 OR4F7P-201ENST00000402444 931 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 OR4F1P-201ENST00000405102 938 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSX3Q99909 OR4F2P-201ENST00000424047 938 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX3Q99909 OR3B1P-201ENST00000437536 893 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AL136455.1-201ENST00000441083 1240 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 ELOBP1-201ENST00000447693 357 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 PA2G4P4-201ENST00000473864 1182 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AL449212.1-201ENST00000499853 517 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AF186996.3-201ENST00000509527 964 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC021733.2-201ENST00000518830 497 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 MRPL40P1-201ENST00000542687 604 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 AC009269.2-201ENST00000559892 474 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC093524.1-201ENST00000564266 1094 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX3Q99909 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX3Q99909 RPL23AP90-201ENST00000603820 236 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AC018690.1-201ENST00000608144 626 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX3Q99909 TUG1_3.1-201ENST00000616187 237 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 PFN1P2-202ENST00000621347 397 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX3Q99909 AL596275.2-208ENST00000641192 594 ntBASIC6.45□□□□□ -1.38
SSX3Q99909 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms